RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 AKR7LQ8NHP1 331 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 DNASE2BQ8WZ79 361 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 FOXC2Q99958 501 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 TMEM70Q9BUB7 260 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 TOMM7Q9P0U1 55 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 SLX4Q8IY92 1834 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 TRAV39A0A0B4J263 110 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 TRAV21A0A0B4J279 112 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 M0QZK8 103 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 TRGV3P03979 118 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 RPL27AP46776 148 aaKnown RBP3.05□□□□□ -1.92
NEB-201ENST00000172853 WNT3P56703 355 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 TMEM42Q69YG0 159 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 MRGPRDQ8TDS7 321 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 R3HDM4Q96D70 268 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 PRDM7Q9NQW5 492 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 ANAPC10Q9UM13 185 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 LAMA4Q16363 1823 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 C7orf66A4D0T2 115 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 GDNFP39905 211 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 UCP3P55916 312 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 TCTN3Q6NUS6 607 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 ARPC1AQ92747 370 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 MCHR2Q969V1 340 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 MKRN2Q9H000 416 aaKnown RBP3.05□□□□□ -1.92
NEB-201ENST00000172853 GDF2Q9UK05 429 aaPredicted RBP3.05□□□□□ -1.92
NEB-201ENST00000172853 ECM29Q5VYK3 1845 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 IGLV3-22A0A075B6J6 115 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 IGHV3-43A0A0B4J1X8 118 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 DUXBA0A1W2PPF3 345 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 IGHV3-43DP0DP04 118 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 FABP4P15090 132 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 JAG1P78504 1218 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 MGAT2Q10469 447 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 TMPRSS13Q9BYE2 586 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 NAT8BQ9UHF3 227 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 ADGRB1O14514 1584 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 MYOD1P15172 320 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 JUNBP17275 347 aaPredicted RBP3.05□□□□□ -1.92
NEB-201ENST00000172853 GP2P55259 537 aaKnown RBP3.05□□□□□ -1.92
NEB-201ENST00000172853 DDX60Q8IY21 1712 aaKnown RBP3.05□□□□□ -1.92
NEB-201ENST00000172853 APOMO95445 188 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 CSN3P07498 182 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 NME1P15531 152 aaKnown RBP3.05□□□□□ -1.92
NEB-201ENST00000172853 ZDHHC24Q6UX98 284 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 ARIH2OSQ8N7S6 290 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 NIPSNAP1Q9BPW8 284 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 SYT11Q9BT88 431 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 MS4A8Q9BY19 250 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 LAMB2P55268 1798 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 DNAJC25-GNG10A0A024R161 153 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 TMEM251Q8N6I4 163 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 SLC35B2Q8TB61 432 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 SPI1P17947 270 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 PCOLCEQ15113 449 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 LINC00596Q86U02 117 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 ZNF561Q8N587 486 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 OR5H6Q8NGV6 325 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 HS3ST2Q9Y278 367 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 NTNG1Q9Y2I2 539 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 UMAD1C9J7I0 102 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 DUSP14O95147 198 aaKnown RBP3.05□□□□□ -1.92
NEB-201ENST00000172853 PDGFAP04085 211 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 IL9P15248 144 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 METRNLQ641Q3 311 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 ANKRD37Q7Z713 158 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 ZNRF1Q8ND25 227 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 OR6X1Q8NH79 312 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 LHX3Q9UBR4 397 aa3.05□□□□□ -1.92
NEB-201ENST00000172853 FITM1A5D6W6 292 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 ASAH1Q13510 395 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 LYPD4Q6UWN0 246 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 PLPPR2Q96GM1 343 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 OPN3Q9H1Y3 402 aaPredicted RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 FBXO8Q9NRD0 319 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 TMEM272A0A1B0GTI8 110 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 ZBTB42B2RXF5 422 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 B9A039 149 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 H3BMM0 161 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 K7N7A8 449 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 PRR35P0CG20 571 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 HOXD9P28356 352 aaPredicted RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 SLC6A12P48065 614 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 C10orf126Q8N4M7 172 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 OR10D3Q8NH80 312 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 UBE2WQ96B02 151 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 TRAV8-6A0A0B4J262 113 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 M6PRP20645 277 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 LEPP41159 167 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 DIO1P49895 249 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 ZNF121P58317 390 aaPredicted RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 MTURNQ8N3F0 131 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 SMRP1Q8NCR6 262 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 ZIC5Q96T25 663 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 DOCK3Q8IZD9 2030 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 SNAP29O95721 258 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 GIPP09681 153 aaPredicted RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 HOXB1P14653 301 aaPredicted RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 TNFRSF1BP20333 461 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 PTBP1P26599 531 aaKnown RBP eCLIP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms