RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 LRRC30A6NM36 301 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 OR2AT4A6NND4 320 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 H0YL77 283 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 M0R233 179 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 SLC33A1O00400 549 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-215ENST00000641371 OR2A4O95047 310 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 VSIG10L2P0DP72 767 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 ZBTB25P24278 435 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 CD34P28906 385 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 SRPXP78539 464 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 HLA-DRB3P79483 266 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 TNFAIP6P98066 277 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-215ENST00000641371 CYCSP99999 105 aaKnown RBP8.22□□□□□ -1.09
PHGDH-215ENST00000641371 DAZAP2Q15038 168 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-215ENST00000641371 EFNB3Q15768 340 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 C4orf17Q53FE4 359 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 C6orf183Q5T699 404 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 AADACL3Q5VUY0 350 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 ZNF660Q6AZW8 331 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-215ENST00000641371 VHLLQ6RSH7 139 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 ZNF497Q6ZNH5 498 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 SGPP2Q8IWX5 399 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 C11orf53Q8IXP5 236 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 OR11H7Q8NGC8 314 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 MARCH1Q8TCQ1 289 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 LRRC29Q8WV35 223 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 MOB3AQ96BX8 217 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 WFIKKN1Q96NZ8 548 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 OR2V2Q96R30 315 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 OR2A7Q96R45 310 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 ZNF2Q9BSG1 426 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-215ENST00000641371 CABLES2Q9BTV7 478 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 WDR13Q9H1Z4 485 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 MS4A5Q9H3V2 200 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 MBNL3Q9NUK0 354 aaKnown RBP8.22□□□□□ -1.09
PHGDH-215ENST00000641371 C1orf123Q9NWV4 160 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 KCNIP1Q9NZI2 227 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 FZR1Q9UM11 496 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 WIPI2Q9Y4P8 454 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 PRR14LQ5THK1 2151 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 CADP27708 2225 aa8.22□□□□□ -1.09
PHGDH-215ENST00000641371 PLCE1Q9P212 2302 aa8.21□□□□□ -1.09
PHGDH-215ENST00000641371 ATRXP46100 2492 aa8.21□□□□□ -1.09
PHGDH-215ENST00000641371 FAM172BPA6NC97 362 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 ZSCAN5BA6NJL1 495 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 FAM90A27PA6NNH2 459 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 C17orf100A8MU93 164 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 B9A039 149 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 F8VVB4 439 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 F8VWA3 439 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 HS3ST1O14792 307 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 SLC22A5O76082 557 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 GOSR1O95249 250 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 SFT2D2O95562 160 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 OR4A8P0C604 315 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 ZNF728P0DKX0 622 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 APOBEC3AP31941 199 aaPredicted RBP8.21□□□□□ -1.1
PHGDH-215ENST00000641371 RND3P61587 244 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 ADORA2A-AS1P86434 159 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 LY6DQ14210 128 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 TMEM30BQ3MIR4 351 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 ABCA11PQ4W5N1 156 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 PRAMEF6Q5VXH4 476 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 MUC20Q8N307 709 aaPredicted RBP8.21□□□□□ -1.1
PHGDH-215ENST00000641371 OR5D13Q8NGL4 314 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 MRPL30Q8TCC3 161 aaKnown RBP8.21□□□□□ -1.1
PHGDH-215ENST00000641371 RDH5Q92781 318 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 KIRREL1Q96J84 757 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 SNX22Q96L94 193 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 ZNF488Q96MN9 340 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 FYTTD1Q96QD9 318 aaKnown RBP8.21□□□□□ -1.1
PHGDH-215ENST00000641371 HDHD3Q9BSH5 251 aaPredicted RBP8.21□□□□□ -1.1
PHGDH-215ENST00000641371 BEX2Q9BXY8 128 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 TMPRSS13Q9BYE2 586 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 DNTTIP1Q9H147 329 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 C5orf66Q9H5L9 145 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 BEX1Q9HBH7 125 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 RAB18Q9NP72 206 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 RNF7Q9UBF6 113 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 DNAJB11Q9UBS4 358 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 TRAPPC2LQ9UL33 140 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 RNF115Q9Y4L5 304 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 USP24Q9UPU5 2620 aa8.21□□□□□ -1.1
PHGDH-215ENST00000641371 CHD3Q12873 2000 aaKnown RBP8.2□□□□□ -1.1
PHGDH-215ENST00000641371 OOEPA6NGQ2 149 aa8.2□□□□□ -1.1
PHGDH-215ENST00000641371 OR5H14A6NHG9 310 aa8.2□□□□□ -1.1
PHGDH-215ENST00000641371 TUBAL3A6NHL2 446 aa8.2□□□□□ -1.1
PHGDH-215ENST00000641371 SDCBPO00560 298 aaPredicted RBP8.2□□□□□ -1.1
PHGDH-215ENST00000641371 SPRY3O43610 288 aa8.2□□□□□ -1.1
PHGDH-215ENST00000641371 LHBP01229 141 aa8.2□□□□□ -1.1
PHGDH-215ENST00000641371 PPYP01298 95 aa8.2□□□□□ -1.1
PHGDH-215ENST00000641371 IGHV1-46P01743 117 aa8.2□□□□□ -1.1
PHGDH-215ENST00000641371 MUC1P15941 1255 aaPredicted RBP8.2□□□□□ -1.1
PHGDH-215ENST00000641371 VAMP1P23763 118 aa8.2□□□□□ -1.1
PHGDH-215ENST00000641371 DNASE1P24855 282 aa8.2□□□□□ -1.1
PHGDH-215ENST00000641371 FCGR2CP31995 323 aa8.2□□□□□ -1.1
PHGDH-215ENST00000641371 SERPINF1P36955 418 aa8.2□□□□□ -1.1
PHGDH-215ENST00000641371 RBMXP38159 391 aaKnown RBP8.2□□□□□ -1.1
PHGDH-215ENST00000641371 NPY4RP50391 375 aa8.2□□□□□ -1.1
PHGDH-215ENST00000641371 SRSF4Q08170 494 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms