RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 CD38P28907 300 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 NUBP1P53384 320 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 MYBPHQ13203 477 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 ZNF695Q8IW36 515 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 SERINC1Q9NRX5 453 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 KLRF1Q9NZS2 232 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 KIAA1456Q9P272 454 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 GOLT1BQ9Y3E0 138 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 MT-ATP6P00846 226 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 SFTPCP11686 197 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 CEACAM1P13688 526 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 SELEP16581 610 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 Q6ZVH6 145 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 TMEM256Q8N2U0 113 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 LFNGQ8NES3 379 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 OR10A7Q8NGE5 316 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 RPRMQ9NS64 109 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 PITPNC1Q9UKF7 332 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 TMED3Q9Y3Q3 217 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 SVILO95425 2214 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 NUPR1O60356 82 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 ZNF43P17038 809 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 FBLP22087 321 aaKnown RBP11.92□□□□□ -0.5
SCARB2-227ENST00000640957 CHRNA7P36544 502 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 CAPZBP47756 277 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 DCAF7P61962 342 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 FOXO1Q12778 655 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 HERPUD1Q15011 391 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 FAM90A2PQ658T7 463 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 TIPARPQ7Z3E1 657 aaKnown RBP11.92□□□□□ -0.5
SCARB2-227ENST00000640957 TMEM183AQ8IXX5 376 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 ADIPOR1Q96A54 375 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 MSI2Q96DH6 328 aaKnown RBP11.92□□□□□ -0.5
SCARB2-227ENST00000640957 DIRC2Q96SL1 478 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 ZNF576Q9H609 170 aa11.92□□□□□ -0.5
SCARB2-227ENST00000640957 HSPA12AO43301 675 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 NPIPB7O75200 414 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 HSD17B7P56937 341 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 SMAD4Q13485 552 aaKnown RBP11.91□□□□□ -0.5
SCARB2-227ENST00000640957 DBX2Q6ZNG2 339 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 GRINAQ7Z429 371 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 PLK3Q9H4B4 646 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 HS3ST3A1Q9Y663 406 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 A0A1W2PPC4 97 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 GRIFINA4D1Z8 144 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 TCF21O43680 179 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 GNG10P50151 68 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 HERV-K104P61576 105 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 ZNF787Q6DD87 383 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 CRIP3Q6Q6R5 217 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 GPR137CQ8N3F9 429 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 ARHGEF39Q8N4T4 335 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 OR51H1Q8NH63 302 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 ZNF442Q9H7R0 627 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 PAM16Q9Y3D7 125 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 GTF3C1Q12789 2109 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 RPL36A-HNRNPH2H7BZ11 118 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 EFNA2O43921 213 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 DFFBO76075 338 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 OR7C1O76099 320 aaPredicted RBP11.91□□□□□ -0.5
SCARB2-227ENST00000640957 DDAH2O95865 285 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 MAS1LP35410 378 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 SLC6A8P48029 635 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 SMIM7Q9BQ49 75 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 RIMS4Q9H426 269 aaPredicted RBP11.91□□□□□ -0.5
SCARB2-227ENST00000640957 RBKSQ9H477 322 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 TTC28Q96AY4 2481 aa11.91□□□□□ -0.5
SCARB2-227ENST00000640957 A0A1W2PNV4 684 aa11.9□□□□□ -0.5
SCARB2-227ENST00000640957 CA11O75493 328 aa11.9□□□□□ -0.5
SCARB2-227ENST00000640957 METTL15P1P0C7V9 234 aa11.9□□□□□ -0.5
SCARB2-227ENST00000640957 FGF5P12034 268 aa11.9□□□□□ -0.5
SCARB2-227ENST00000640957 LTBRP36941 435 aa11.9□□□□□ -0.5
SCARB2-227ENST00000640957 ZNF266Q14584 549 aa11.9□□□□□ -0.5
SCARB2-227ENST00000640957 ZNF721Q8TF20 911 aa11.9□□□□□ -0.5
SCARB2-227ENST00000640957 CDCA3Q99618 268 aaPredicted RBP11.9□□□□□ -0.5
SCARB2-227ENST00000640957 RBM24Q9BX46 236 aaKnown RBP11.9□□□□□ -0.5
SCARB2-227ENST00000640957 OPN3Q9H1Y3 402 aaPredicted RBP11.9□□□□□ -0.5
SCARB2-227ENST00000640957 PTPRZ1P23471 2315 aaPredicted RBP11.9□□□□□ -0.5
SCARB2-227ENST00000640957 M0R143 59 aa11.9□□□□□ -0.5
SCARB2-227ENST00000640957 IRF2P14316 349 aa11.9□□□□□ -0.5
SCARB2-227ENST00000640957 OR10J5Q8NHC4 309 aa11.9□□□□□ -0.5
SCARB2-227ENST00000640957 SLC46A1Q96NT5 459 aa11.9□□□□□ -0.5
SCARB2-227ENST00000640957 NECAP2Q9NVZ3 263 aa11.9□□□□□ -0.5
SCARB2-227ENST00000640957 TRAV39A0A0B4J263 110 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 G3V3Y1 287 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 DAP3P51398 398 aaKnown RBP11.89□□□□□ -0.51
SCARB2-227ENST00000640957 RPP30P78346 268 aaKnown RBP11.89□□□□□ -0.51
SCARB2-227ENST00000640957 ZFP36L1Q07352 338 aaKnown RBP11.89□□□□□ -0.51
SCARB2-227ENST00000640957 HLA-BQ31612 363 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 SNAI3Q3KNW1 292 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 RHBDD1Q8TEB9 315 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 A0A1B0GU03 582 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 PGPEP1LA6NFU8 196 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 PPP5D1E7EU14 171 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 TGOLN2O43493 480 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 ZNF16P17020 682 aaPredicted RBP11.89□□□□□ -0.51
SCARB2-227ENST00000640957 COL8A2P25067 703 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 OR5I1Q13606 314 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 ERASQ7Z444 233 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 PRR18Q8N4B5 295 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms