RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 GDNFP39905 211 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 CAPGP40121 348 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 CEACAM3P40198 252 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 GPR12P47775 334 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 CFHR3Q02985 330 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 ZNF616Q08AN1 781 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 HES1Q14469 280 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 HLA-DRB5Q30154 266 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 SLC25A30Q5SVS4 291 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 UTF1Q5T230 341 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 FAM53AQ6NSI3 398 aaPredicted RBP10.74□□□□□ -0.69
SNX1-214ENST00000625244 SGPP2Q8IWX5 399 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 ENTHD1Q8IYW4 607 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 C8orf59Q8N0T1 100 aaPredicted RBP10.74□□□□□ -0.69
SNX1-214ENST00000625244 TRMT10AQ8TBZ6 339 aaKnown RBP10.74□□□□□ -0.69
SNX1-214ENST00000625244 FAM110AQ9BQ89 295 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 ABHD6Q9BV23 337 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 GNB4Q9HAV0 340 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 MAGEA13PA6NCF6 341 aa10.73□□□□□ -0.69
SNX1-214ENST00000625244 I3L521 148 aa10.73□□□□□ -0.69
SNX1-214ENST00000625244 ENTPD6O75354 484 aa10.73□□□□□ -0.69
SNX1-214ENST00000625244 GNB1P62873 340 aa10.73□□□□□ -0.69
SNX1-214ENST00000625244 RBM39Q14498 530 aaKnown RBP10.73□□□□□ -0.69
SNX1-214ENST00000625244 ZNF691Q5VV52 312 aa10.73□□□□□ -0.69
SNX1-214ENST00000625244 PLCXD3Q63HM9 321 aa10.73□□□□□ -0.69
SNX1-214ENST00000625244 CATSPERDQ86XM0 798 aa10.73□□□□□ -0.69
SNX1-214ENST00000625244 SLC35F2Q8IXU6 374 aa10.73□□□□□ -0.69
SNX1-214ENST00000625244 OR8B12Q8NGG6 310 aa10.73□□□□□ -0.69
SNX1-214ENST00000625244 DLX4Q92988 240 aaPredicted RBP10.73□□□□□ -0.69
SNX1-214ENST00000625244 MRPL48Q96GC5 212 aaKnown RBP10.73□□□□□ -0.69
SNX1-214ENST00000625244 SNX22Q96L94 193 aa10.73□□□□□ -0.69
SNX1-214ENST00000625244 GON7Q9BXV9 100 aa10.73□□□□□ -0.69
SNX1-214ENST00000625244 MROQ9BYG7 248 aa10.73□□□□□ -0.69
SNX1-214ENST00000625244 NIPAL2Q9H841 368 aa10.73□□□□□ -0.69
SNX1-214ENST00000625244 IKZF2Q9UKS7 526 aa10.73□□□□□ -0.69
SNX1-214ENST00000625244 MUC4Q99102 2169 aa10.73□□□□□ -0.69
SNX1-214ENST00000625244 OOSP1A8MZH6 123 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 F8VVB4 439 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 F8VWA3 439 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 DLGAP1O14490 977 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 IGHG4P01861 327 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 OR2T7P0C7T2 308 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 ALOX5APP20292 161 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 CDK2P24941 298 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 PSMB8P28062 276 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 CD34P28906 385 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 VHLP40337 213 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 MAP2K3P46734 347 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 AQP4P55087 323 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 ERVK11-1P61568 191 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 KIAA0141Q14154 515 aaPredicted RBP10.72□□□□□ -0.69
SNX1-214ENST00000625244 OR52W1Q6IF63 320 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 IZUMO2Q6UXV1 221 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 TRAPPC6BQ86SZ2 158 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 HAPLN4Q86UW8 402 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 OR10H4Q8NGA5 316 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 OR52N4Q8NGI2 321 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 RHOXF1Q8NHV9 184 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 MYOZ3Q8TDC0 251 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 CREB3L1Q96BA8 519 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 OR5B12Q96R08 314 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 NABP2Q9BQ15 211 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 CHST6Q9GZX3 395 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 ADGRL4Q9HBW9 690 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 POLDIP2Q9Y2S7 368 aa10.72□□□□□ -0.69
SNX1-214ENST00000625244 RPL36Q9Y3U8 105 aaKnown RBP10.72□□□□□ -0.69
SNX1-214ENST00000625244 HSPG2P98160 4391 aa10.71□□□□□ -0.69
SNX1-214ENST00000625244 IRGMA1A4Y4 181 aa10.71□□□□□ -0.69
SNX1-214ENST00000625244 TOR1AO14656 332 aa10.71□□□□□ -0.69
SNX1-214ENST00000625244 ZNF254O75437 659 aa10.71□□□□□ -0.69
SNX1-214ENST00000625244 DEDDO75618 318 aa10.71□□□□□ -0.69
SNX1-214ENST00000625244 IGHA1P01876 353 aa10.71□□□□□ -0.69
SNX1-214ENST00000625244 FSTP19883 344 aa10.71□□□□□ -0.69
SNX1-214ENST00000625244 RIDAP52758 137 aaKnown RBP10.71□□□□□ -0.69
SNX1-214ENST00000625244 CXCR4P61073 352 aa10.71□□□□□ -0.69
SNX1-214ENST00000625244 ADARB1P78563 741 aaKnown RBP10.71□□□□□ -0.69
SNX1-214ENST00000625244 GRK1Q15835 563 aa10.71□□□□□ -0.69
SNX1-214ENST00000625244 DEGS2Q6QHC5 323 aa10.71□□□□□ -0.69
SNX1-214ENST00000625244 HEPN1Q6WQI6 88 aa10.71□□□□□ -0.69
SNX1-214ENST00000625244 FAM220AQ7Z4H9 259 aa10.71□□□□□ -0.69
SNX1-214ENST00000625244 ZNF573Q86YE8 665 aa10.71□□□□□ -0.69
SNX1-214ENST00000625244 NRG4Q8WWG1 115 aa10.71□□□□□ -0.69
SNX1-214ENST00000625244 ARPC1AQ92747 370 aa10.71□□□□□ -0.69
SNX1-214ENST00000625244 RPEQ96AT9 228 aa10.71□□□□□ -0.69
SNX1-214ENST00000625244 TBX5Q99593 518 aa10.71□□□□□ -0.69
SNX1-214ENST00000625244 UBE2J1Q9Y385 318 aaPredicted RBP10.71□□□□□ -0.69
SNX1-214ENST00000625244 KIAA2026Q5HYC2 2103 aa10.7□□□□□ -0.7
SNX1-214ENST00000625244 A0A1W2PPI3 338 aa10.7□□□□□ -0.7
SNX1-214ENST00000625244 APOL3O95236 402 aa10.7□□□□□ -0.7
SNX1-214ENST00000625244 FADS2O95864 444 aaKnown RBP10.7□□□□□ -0.7
SNX1-214ENST00000625244 IGKV1D-33P01593 117 aa10.7□□□□□ -0.7
SNX1-214ENST00000625244 IGKV1-33P01594 117 aa10.7□□□□□ -0.7
SNX1-214ENST00000625244 KRT8P05787 483 aa10.7□□□□□ -0.7
SNX1-214ENST00000625244 DBTP11182 482 aaKnown RBP10.7□□□□□ -0.7
SNX1-214ENST00000625244 ARSBP15848 533 aa10.7□□□□□ -0.7
SNX1-214ENST00000625244 MPZP25189 248 aa10.7□□□□□ -0.7
SNX1-214ENST00000625244 SLURP1P55000 103 aa10.7□□□□□ -0.7
SNX1-214ENST00000625244 RUNX1Q01196 453 aa10.7□□□□□ -0.7
SNX1-214ENST00000625244 ZNF91Q05481 1191 aa10.7□□□□□ -0.7
SNX1-214ENST00000625244 MED21Q13503 144 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms