RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 GPR6P46095 362 aaPredicted RBP4.42□□□□□ -1.7
SHMT1-211ENST00000618902 VEGFCP49767 419 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 DVL1P1P54792 670 aaPredicted RBP4.42□□□□□ -1.7
SHMT1-211ENST00000618902 BPIFB3P59826 476 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 RPS27AP62979 156 aaKnown RBP4.42□□□□□ -1.7
SHMT1-211ENST00000618902 UBA52P62987 128 aaKnown RBP4.42□□□□□ -1.7
SHMT1-211ENST00000618902 CCL8P80075 99 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 OR8B8Q15620 311 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 AANATQ16613 207 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 PNLIPRP3Q17RR3 467 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 GFOD2Q3B7J2 385 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 TMEM155Q4W5P6 130 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 DMRTC1Q5HYR2 192 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 WDR38Q5JTN6 314 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 HES5Q5TA89 166 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 EIF5AL1Q6IS14 154 aaKnown RBP4.42□□□□□ -1.7
SHMT1-211ENST00000618902 Q6ZSR3 168 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 TMUB2Q71RG4 321 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 OR2W3Q7Z3T1 314 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 WDR86Q86TI4 376 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 GLCCI1Q86VQ1 547 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 COMMD7Q86VX2 200 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 MUC20Q8N307 709 aaPredicted RBP4.42□□□□□ -1.7
SHMT1-211ENST00000618902 C12orf45Q8N5I9 185 aaPredicted RBP4.42□□□□□ -1.7
SHMT1-211ENST00000618902 OR8G5Q8NG78 346 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 OR2AK2Q8NG84 335 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 OR11H4Q8NGC9 324 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 OR10AD1Q8NGE0 317 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 LHFPL5Q8TAF8 219 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 OR51E1Q8TCB6 317 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 TNFAIP8L1Q8WVP5 186 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 ITLN1Q8WWA0 313 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 RGP1Q92546 391 aaPredicted RBP4.42□□□□□ -1.7
SHMT1-211ENST00000618902 PGAM5Q96HS1 289 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 GINS4Q9BRT9 223 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 OR10A2Q9H208 303 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 TMEM138Q9NPI0 162 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 GPR84Q9NQS5 396 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 MRPL15Q9P015 296 aaKnown RBP4.42□□□□□ -1.7
SHMT1-211ENST00000618902 PIPOXQ9P0Z9 390 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 ZNF69Q9UC07 566 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 SHPKQ9UHJ6 478 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 OR52A1Q9UKL2 312 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 POLR3KQ9Y2Y1 108 aaPredicted RBP4.42□□□□□ -1.7
SHMT1-211ENST00000618902 RHBDD3Q9Y3P4 386 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 DYSFO75923 2080 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 DOCK11Q5JSL3 2073 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 TRAV18A0A075B6X5 111 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 A0A0U1RQV5 110 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 A0A1W2PPK0 400 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 RPS10-NUDT3A0A1W2PQS6 291 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 hCG_1807616A0A1W2PRN6 198 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 RAB19A4D1S5 217 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 MFSD2BA6NFX1 497 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 A6NIN4 97 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 CEACAM18A8MTB9 384 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 A8MXK9 166 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 ZNF736B4DX44 427 aaPredicted RBP4.41□□□□□ -1.7
SHMT1-211ENST00000618902 I3L521 148 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 LDLRAD4O15165 306 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 XRCC2O43543 280 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 CDC14BO60729 498 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 PTBP3O95758 552 aaKnown RBP4.41□□□□□ -1.7
SHMT1-211ENST00000618902 MAS1P04201 325 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 GSTP1P09211 210 aaKnown RBP4.41□□□□□ -1.7
SHMT1-211ENST00000618902 GTF2F2P13984 249 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 HOXB4P17483 251 aaPredicted RBP4.41□□□□□ -1.7
SHMT1-211ENST00000618902 ADRA2CP18825 462 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 CCL1P22362 96 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 CA6P23280 308 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 POU3F4P49335 361 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 KRTAP1-1Q07627 177 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 SURF2Q15527 256 aaPredicted RBP4.41□□□□□ -1.7
SHMT1-211ENST00000618902 ODF4Q2M2E3 257 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 C4orf46Q504U0 113 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 AWAT2Q6E213 333 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 ASPHD2Q6ICH7 369 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 GSG1LQ6UXU4 331 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 ACOT7LQ6ZUV0 252 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 OVCH2Q7RTZ1 564 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 MRPL21Q7Z2W9 205 aaKnown RBP4.41□□□□□ -1.7
SHMT1-211ENST00000618902 RNF144BQ7Z419 303 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 ZNF546Q86UE3 836 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 TMEM17Q86X19 198 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 C11orf53Q8IXP5 236 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 IZUMO1Q8IYV9 350 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 ARRDC1Q8N5I2 433 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 MAPK1IP1LQ8NDC0 245 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 CSNK2A3Q8NEV1 391 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 OR2Z1Q8NG97 314 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 OR14K1Q8NGZ2 314 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 OR51F2Q8NH61 342 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 Q8TCH9 128 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 TSEN15Q8WW01 171 aaKnown RBP4.41□□□□□ -1.7
SHMT1-211ENST00000618902 HPSE2Q8WWQ2 592 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 FAM46BQ96A09 425 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 SLC25A28Q96A46 364 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 SEH1LQ96EE3 360 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 CPNE2Q96FN4 548 aaPredicted RBP4.41□□□□□ -1.7
SHMT1-211ENST00000618902 FAM71F1Q96KD3 344 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms