RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 ARSJQ5FYB0 599 aaPredicted RBP15.31■□□□□ 0.04
CCDC28A-203ENST00000617445 PACRGLQ8N7B6 248 aa15.31■□□□□ 0.04
CCDC28A-203ENST00000617445 C11orf44Q8N8P7 122 aa15.31■□□□□ 0.04
CCDC28A-203ENST00000617445 CNIH3Q8TBE1 160 aa15.31■□□□□ 0.04
CCDC28A-203ENST00000617445 WIPF2Q8TF74 440 aaPredicted RBP15.31■□□□□ 0.04
CCDC28A-203ENST00000617445 CAPSLQ8WWF8 208 aa15.31■□□□□ 0.04
CCDC28A-203ENST00000617445 TMEM106AQ96A25 262 aa15.31■□□□□ 0.04
CCDC28A-203ENST00000617445 NR1H4Q96RI1 486 aaPredicted RBP15.31■□□□□ 0.04
CCDC28A-203ENST00000617445 WNT10AQ9GZT5 417 aa15.31■□□□□ 0.04
CCDC28A-203ENST00000617445 TMEM138Q9NPI0 162 aa15.31■□□□□ 0.04
CCDC28A-203ENST00000617445 PCDHB16Q9NRJ7 776 aa15.31■□□□□ 0.04
CCDC28A-203ENST00000617445 PAK1IP1Q9NWT1 392 aaPredicted RBP15.31■□□□□ 0.04
CCDC28A-203ENST00000617445 CHCHD3Q9NX63 227 aaKnown RBP15.31■□□□□ 0.04
CCDC28A-203ENST00000617445 ZNF281Q9Y2X9 895 aa15.31■□□□□ 0.04
CCDC28A-203ENST00000617445 BUB1B-PAK6H3BSN5 160 aa15.3■□□□□ 0.04
CCDC28A-203ENST00000617445 GABRPO00591 440 aa15.3■□□□□ 0.04
CCDC28A-203ENST00000617445 CGB3P0DN86 165 aa15.3■□□□□ 0.04
CCDC28A-203ENST00000617445 CGB7P0DN87 165 aa15.3■□□□□ 0.04
CCDC28A-203ENST00000617445 SOX2P48431 317 aa15.3■□□□□ 0.04
CCDC28A-203ENST00000617445 PPP3R1P63098 170 aa15.3■□□□□ 0.04
CCDC28A-203ENST00000617445 HABP2Q14520 560 aaPredicted RBP15.3■□□□□ 0.04
CCDC28A-203ENST00000617445 ATXN7L3Q14CW9 347 aaPredicted RBP15.3■□□□□ 0.04
CCDC28A-203ENST00000617445 HLA-DRB5Q30154 266 aa15.3■□□□□ 0.04
CCDC28A-203ENST00000617445 NDUFA11Q86Y39 141 aa15.3■□□□□ 0.04
CCDC28A-203ENST00000617445 OR51A2Q8NGJ7 313 aa15.3■□□□□ 0.04
CCDC28A-203ENST00000617445 RGP1Q92546 391 aaPredicted RBP15.3■□□□□ 0.04
CCDC28A-203ENST00000617445 SMIM19Q96E16 107 aa15.3■□□□□ 0.04
CCDC28A-203ENST00000617445 LINC00574Q9H8X3 128 aa15.3■□□□□ 0.04
CCDC28A-203ENST00000617445 TAS2R4Q9NYW5 299 aa15.3■□□□□ 0.04
CCDC28A-203ENST00000617445 IL36GQ9NZH8 169 aa15.3■□□□□ 0.04
CCDC28A-203ENST00000617445 TRAV24A0A0B4J272 114 aa15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 MNDAP41218 407 aa15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 VDAC2P45880 294 aaPredicted RBP15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 BLCAPP62952 87 aa15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 C17orf58Q2M2W7 97 aa15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 NHLRC3Q5JS37 347 aa15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 BAIAP2L2Q6UXY1 529 aa15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 SLC16A12Q6ZSM3 486 aa15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 OR10A7Q8NGE5 316 aa15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 OR9G1Q8NH87 305 aa15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 TMEM80Q96HE8 168 aa15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 S100A13Q99584 98 aa15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 FAM192AQ9GZU8 254 aa15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 METTL9Q9H1A3 318 aa15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 IFT22Q9H7X7 185 aa15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 ZNF286AQ9HBT8 521 aa15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 ING3Q9NXR8 418 aa15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 AMMECR1Q9Y4X0 333 aaPredicted RBP15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 HSPE1-MOB4S4R3N1 261 aa15.29■□□□□ 0.04
CCDC28A-203ENST00000617445 MEIKINA0A087WXM9 373 aa15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 LY6LH3BQJ8 138 aa15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 ZNF780AO75290 641 aaPredicted RBP15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 JUNBP17275 347 aaPredicted RBP15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 ZNF93P35789 620 aaPredicted RBP15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 GDNFP39905 211 aa15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 TPTE2P1Q5T6R2 138 aa15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 OR2G6Q5TZ20 316 aa15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 XAF1Q6GPH4 301 aa15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 LINC00596Q86U02 117 aa15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 DHRSXQ8N5I4 330 aa15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 OR4F17Q8NGA8 305 aa15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 OR52N1Q8NH53 320 aa15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 CYGBQ8WWM9 190 aa15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 KIRREL1Q96J84 757 aa15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 OR4F4Q96R69 305 aa15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 OCSTAMPQ9BR26 566 aa15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 PPIL3Q9H2H8 161 aaKnown RBP15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 KIF25Q9UIL4 384 aa15.28■□□□□ 0.04
CCDC28A-203ENST00000617445 M0QZK8 103 aa15.27■□□□□ 0.04
CCDC28A-203ENST00000617445 GPX5O75715 221 aa15.27■□□□□ 0.04
CCDC28A-203ENST00000617445 OR2F2O95006 317 aa15.27■□□□□ 0.04
CCDC28A-203ENST00000617445 HTR3BO95264 441 aa15.27■□□□□ 0.04
CCDC28A-203ENST00000617445 CSTBP04080 98 aaKnown RBP15.27■□□□□ 0.04
CCDC28A-203ENST00000617445 CD28P10747 220 aa15.27■□□□□ 0.04
CCDC28A-203ENST00000617445 NFYBP25208 207 aa15.27■□□□□ 0.04
CCDC28A-203ENST00000617445 BDKRB2P30411 391 aa15.27■□□□□ 0.04
CCDC28A-203ENST00000617445 GLP1RP43220 463 aa15.27■□□□□ 0.04
CCDC28A-203ENST00000617445 DDI2Q5TDH0 399 aa15.27■□□□□ 0.04
CCDC28A-203ENST00000617445 OSR2Q8N2R0 312 aa15.27■□□□□ 0.04
CCDC28A-203ENST00000617445 RBM14Q96PK6 669 aaKnown RBP15.27■□□□□ 0.04
CCDC28A-203ENST00000617445 MMP28Q9H239 520 aa15.27■□□□□ 0.04
CCDC28A-203ENST00000617445 CALYQ9NYX4 217 aa15.27■□□□□ 0.04
CCDC28A-203ENST00000617445 CKLFQ9UBR5 152 aa15.27■□□□□ 0.04
CCDC28A-203ENST00000617445 ING4Q9UNL4 249 aa15.27■□□□□ 0.04
CCDC28A-203ENST00000617445 ST3GAL6Q9Y274 331 aa15.27■□□□□ 0.04
CCDC28A-203ENST00000617445 NPIPB11E5RHQ5 1161 aa15.26■□□□□ 0.03
CCDC28A-203ENST00000617445 HSPB6O14558 160 aa15.26■□□□□ 0.03
CCDC28A-203ENST00000617445 XPNPEP2O43895 674 aa15.26■□□□□ 0.03
CCDC28A-203ENST00000617445 CLIC3O95833 236 aa15.26■□□□□ 0.03
CCDC28A-203ENST00000617445 IL1AP01583 271 aa15.26■□□□□ 0.03
CCDC28A-203ENST00000617445 GZMHP20718 246 aa15.26■□□□□ 0.03
CCDC28A-203ENST00000617445 TAS2R43P59537 309 aa15.26■□□□□ 0.03
CCDC28A-203ENST00000617445 ADARB1P78563 741 aaKnown RBP15.26■□□□□ 0.03
CCDC28A-203ENST00000617445 RIPK1Q13546 671 aa15.26■□□□□ 0.03
CCDC28A-203ENST00000617445 GPR176Q14439 515 aa15.26■□□□□ 0.03
CCDC28A-203ENST00000617445 LRRC36Q1X8D7 754 aa15.26■□□□□ 0.03
CCDC28A-203ENST00000617445 PIGYQ3MUY2 71 aa15.26■□□□□ 0.03
CCDC28A-203ENST00000617445 YIF1BQ5BJH7 314 aa15.26■□□□□ 0.03
CCDC28A-203ENST00000617445 RSBN1Q5VWQ0 802 aaPredicted RBP15.26■□□□□ 0.03
CCDC28A-203ENST00000617445 DMKNQ6E0U4 476 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms