RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 HFEQ30201 348 aa5.96□□□□□ -1.45
SYNPO2-206ENST00000610556 ZNF528Q3MIS6 628 aa5.96□□□□□ -1.45
SYNPO2-206ENST00000610556 C9orf152Q5JTZ5 239 aa5.96□□□□□ -1.45
SYNPO2-206ENST00000610556 ZNF574Q6ZN55 896 aaPredicted RBP5.96□□□□□ -1.45
SYNPO2-206ENST00000610556 COMMD1Q8N668 190 aa5.96□□□□□ -1.45
SYNPO2-206ENST00000610556 OR2Y1Q8NGV0 311 aa5.96□□□□□ -1.45
SYNPO2-206ENST00000610556 RFESDQ8TAC1 157 aa5.96□□□□□ -1.45
SYNPO2-206ENST00000610556 TVP23CQ96ET8 276 aa5.96□□□□□ -1.45
SYNPO2-206ENST00000610556 CYYR1Q96J86 154 aa5.96□□□□□ -1.45
SYNPO2-206ENST00000610556 SMIM7Q9BQ49 75 aa5.96□□□□□ -1.45
SYNPO2-206ENST00000610556 CDH23Q9H251 3354 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 PIGBOS1A0A0B4J2F0 54 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 CLEC18AA5D8T8 446 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 YIF1AO95070 293 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 SEC11BP0C7V7 166 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 DTYMKP23919 212 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 SRD5A2P31213 254 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 ENDOGQ14249 297 aaKnown RBP5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 SPINK9Q5DT21 86 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 RBMS3Q6XE24 437 aaKnown RBP5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF573Q86YE8 665 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 MRPL41Q8IXM3 137 aaKnown RBP5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 C1orf87Q8N0U7 546 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 CLEC18CQ8NCF0 446 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 DMBX1Q8NFW5 382 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 CLDN23Q96B33 292 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 MALSU1Q96EH3 234 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 Q96M66 194 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 GAR1Q9NY12 217 aaKnown RBP5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 H3BQ15 152 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 H7BYZ3 331 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 TOX3O15405 576 aaPredicted RBP5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 FBP1P09467 338 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 EIF2S3P41091 472 aaKnown RBP5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 RAB4BP61018 213 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 SUPT4H1P63272 117 aaKnown RBP5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 FAM3AP98173 230 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 PDLIM3Q53GG5 364 aaPredicted RBP5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 TUSC5Q8IXB3 177 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 FAM185AQ8N0U4 392 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 OR1K1Q8NGR3 316 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 APOBEC3DQ96AK3 386 aaPredicted RBP5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 SRXN1Q9BYN0 137 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 GCM1Q9NP62 436 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 PI4KAP42356 2102 aa5.96□□□□□ -1.46
SYNPO2-206ENST00000610556 A0A1W2PPQ1 181 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF705FA8MVS1 300 aaPredicted RBP5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 TSTD3H0UI37 97 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 AP4M1O00189 453 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF705DP0CH99 300 aaPredicted RBP5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF705BP0CI00 300 aaPredicted RBP5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 FABP4P15090 132 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 VDAC1P21796 283 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 GCH1P30793 250 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 WDFY1Q8IWB7 410 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 GCNT2Q8N0V5 402 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 TMEM252Q8N6L7 170 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF441Q8N8Z8 693 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF610Q8N9Z0 462 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 NFAM1Q8NET5 270 aaPredicted RBP5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 OR4F5Q8NH21 305 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 MAFAQ8NHW3 353 aaPredicted RBP5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 NTNG2Q96CW9 530 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 ADGRG7Q96K78 797 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 LYZL4Q96KX0 146 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 OR4F4Q96R69 305 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 GPR35Q9HC97 309 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 LHX6Q9UPM6 363 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 LAMP3Q9UQV4 416 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 HS3ST3B1Q9Y662 390 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 POMT1Q9Y6A1 747 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 DIDO1Q9BTC0 2240 aaKnown RBP5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 SHANK1Q9Y566 2161 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 NPIPB13A6NJU9 1138 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 NPIPB4C9JG80 1138 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 H0YL77 283 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 TIMM8AO60220 97 aaPredicted RBP5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 IGHV3-13P01766 116 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 IGHV3-7P01780 117 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 IGHEP01854 428 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 GAPDHP04406 335 aaKnown RBP5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 HLA-GP17693 338 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 HNF1AP20823 631 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 PSMB3P49720 205 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 FABP6P51161 128 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 RBM11P57052 281 aaKnown RBP5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 DLK1P80370 383 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 CATR1Q13166 79 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF468Q5VIY5 522 aaPredicted RBP5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 DHRS7BQ6IAN0 325 aaPredicted RBP5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 CYB561D1Q8N8Q1 229 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 BSCL2Q96G97 398 aaPredicted RBP5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF581Q9P0T4 197 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 CACFD1Q9UGQ2 172 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 KIAA2026Q5HYC2 2103 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 NBASA2RRP1 2371 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 PHOX2AO14813 284 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 LY86O95711 162 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 CST2P09228 141 aa5.95□□□□□ -1.46
SYNPO2-206ENST00000610556 CD46P15529 392 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms