RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 TMEM203Q969S6 136 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 PPIL3Q9H2H8 161 aaKnown RBP13.61□□□□□ -0.23
SSBP4-213ENST00000602088 DPAGT1Q9H3H5 408 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 TCF7L1Q9HCS4 588 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 TAS2R3Q9NYW6 316 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 ZNF581Q9P0T4 197 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 HSPB6O14558 160 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 GEMIN2O14893 280 aaKnown RBP13.6□□□□□ -0.23
SSBP4-213ENST00000602088 MMP23AO75900 390 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 CLPXO76031 633 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 GABARAPL2P60520 117 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 RPS25P62851 125 aaKnown RBP13.6□□□□□ -0.23
SSBP4-213ENST00000602088 PAX5Q02548 391 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 FOXL1Q12952 345 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 TRAM1Q15629 374 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 HSD17B12Q53GQ0 312 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 C12orf54Q6X4T0 127 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 LINC00596Q86U02 117 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 LRRTM1Q86UE6 522 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 SUMF2Q8NBJ7 301 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 MRPS24Q96EL2 167 aaKnown RBP13.6□□□□□ -0.23
SSBP4-213ENST00000602088 UQCC2Q9BRT2 126 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 MEGF9Q9H1U4 602 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 GAL3ST2Q9H3Q3 398 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 NCOR1P1Q9H4R4 102 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 ING3Q9NXR8 418 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 SESN1Q9Y6P5 492 aa13.6□□□□□ -0.23
SSBP4-213ENST00000602088 FAM90A8PA6NJQ4 464 aa13.59□□□□□ -0.23
SSBP4-213ENST00000602088 ODF3BA8MYP8 253 aa13.59□□□□□ -0.23
SSBP4-213ENST00000602088 MRPS14O60783 128 aaKnown RBP13.59□□□□□ -0.23
SSBP4-213ENST00000602088 OR7C1O76099 320 aaPredicted RBP13.59□□□□□ -0.23
SSBP4-213ENST00000602088 PSMA1P25786 263 aaKnown RBP13.59□□□□□ -0.23
SSBP4-213ENST00000602088 KCNJ3P48549 501 aa13.59□□□□□ -0.23
SSBP4-213ENST00000602088 LGALS4P56470 323 aa13.59□□□□□ -0.23
SSBP4-213ENST00000602088 EMX1Q04741 257 aaPredicted RBP13.59□□□□□ -0.23
SSBP4-213ENST00000602088 TAF9Q16594 264 aa13.59□□□□□ -0.23
SSBP4-213ENST00000602088 MPV17LQ2QL34 196 aa13.59□□□□□ -0.23
SSBP4-213ENST00000602088 ZNF626Q68DY1 528 aa13.59□□□□□ -0.23
SSBP4-213ENST00000602088 AWAT2Q6E213 333 aa13.59□□□□□ -0.23
SSBP4-213ENST00000602088 HEPN1Q6WQI6 88 aa13.59□□□□□ -0.23
SSBP4-213ENST00000602088 ZNF367Q7RTV3 350 aa13.59□□□□□ -0.23
SSBP4-213ENST00000602088 PLPPR1Q8TBJ4 325 aa13.59□□□□□ -0.23
SSBP4-213ENST00000602088 DYRK2Q92630 601 aa13.59□□□□□ -0.23
SSBP4-213ENST00000602088 DPCDQ9BVM2 203 aaPredicted RBP13.59□□□□□ -0.23
SSBP4-213ENST00000602088 YTHDF1Q9BYJ9 559 aaKnown RBP13.59□□□□□ -0.23
SSBP4-213ENST00000602088 BARHL1Q9BZE3 327 aa13.59□□□□□ -0.23
SSBP4-213ENST00000602088 ACOT13Q9NPJ3 140 aa13.59□□□□□ -0.23
SSBP4-213ENST00000602088 OR6C3Q9NZP0 311 aa13.59□□□□□ -0.23
SSBP4-213ENST00000602088 ANK2Q01484 3957 aa13.59□□□□□ -0.23
SSBP4-213ENST00000602088 CGB3P0DN86 165 aa13.58□□□□□ -0.24
SSBP4-213ENST00000602088 CGB7P0DN87 165 aa13.58□□□□□ -0.24
SSBP4-213ENST00000602088 CD37P11049 281 aa13.58□□□□□ -0.24
SSBP4-213ENST00000602088 AWAT1Q58HT5 328 aa13.58□□□□□ -0.24
SSBP4-213ENST00000602088 C1orf100Q5SVJ3 147 aa13.58□□□□□ -0.24
SSBP4-213ENST00000602088 RSBN1Q5VWQ0 802 aaPredicted RBP13.58□□□□□ -0.24
SSBP4-213ENST00000602088 GLT8D1Q68CQ7 371 aa13.58□□□□□ -0.24
SSBP4-213ENST00000602088 LHFPL4Q7Z7J7 247 aa13.58□□□□□ -0.24
SSBP4-213ENST00000602088 TMEM104Q8NE00 496 aa13.58□□□□□ -0.24
SSBP4-213ENST00000602088 TAF15Q92804 592 aaKnown RBP eCLIP13.58□□□□□ -0.243e-6■■■□□ 16.3
SSBP4-213ENST00000602088 FOXRED1Q96CU9 486 aaPredicted RBP13.58□□□□□ -0.24
SSBP4-213ENST00000602088 TMEM133Q9H2Q1 129 aa13.58□□□□□ -0.24
SSBP4-213ENST00000602088 GHRLQ9UBU3 117 aa13.58□□□□□ -0.24
SSBP4-213ENST00000602088 KIF25Q9UIL4 384 aa13.58□□□□□ -0.24
SSBP4-213ENST00000602088 TBL2Q9Y4P3 447 aaKnown RBP13.58□□□□□ -0.24
SSBP4-213ENST00000602088 MEIKINA0A087WXM9 373 aa13.57□□□□□ -0.24
SSBP4-213ENST00000602088 IGHV2-26A0A0B4J1V2 119 aa13.57□□□□□ -0.24
SSBP4-213ENST00000602088 ZNF729A6NN14 1252 aaPredicted RBP13.57□□□□□ -0.24
SSBP4-213ENST00000602088 GPR137BO60478 399 aa13.57□□□□□ -0.24
SSBP4-213ENST00000602088 ARG1P05089 322 aa13.57□□□□□ -0.24
SSBP4-213ENST00000602088 CDK2P24941 298 aa13.57□□□□□ -0.24
SSBP4-213ENST00000602088 PAX6P26367 422 aa13.57□□□□□ -0.24
SSBP4-213ENST00000602088 GABRA5P31644 462 aa13.57□□□□□ -0.24
SSBP4-213ENST00000602088 RPL15P61313 204 aaKnown RBP13.57□□□□□ -0.24
SSBP4-213ENST00000602088 C17orf58Q2M2W7 97 aa13.57□□□□□ -0.24
SSBP4-213ENST00000602088 PRAMEF5Q5TYX0 476 aa13.57□□□□□ -0.24
SSBP4-213ENST00000602088 OR52W1Q6IF63 320 aa13.57□□□□□ -0.24
SSBP4-213ENST00000602088 ZNF565Q8N9K5 539 aa13.57□□□□□ -0.24
SSBP4-213ENST00000602088 OR13A1Q8NGR1 328 aa13.57□□□□□ -0.24
SSBP4-213ENST00000602088 OR5R1Q8NH85 324 aa13.57□□□□□ -0.24
SSBP4-213ENST00000602088 BANF2Q9H503 90 aa13.57□□□□□ -0.24
SSBP4-213ENST00000602088 KBTBD11-OT1A0A1B0GTJ5 212 aa13.56□□□□□ -0.24
SSBP4-213ENST00000602088 BTBD17A6NE02 478 aa13.56□□□□□ -0.24
SSBP4-213ENST00000602088 CRTAPO75718 401 aaPredicted RBP13.56□□□□□ -0.24
SSBP4-213ENST00000602088 ARL6IP5O75915 188 aa13.56□□□□□ -0.24
SSBP4-213ENST00000602088 CRYBA1P05813 215 aa13.56□□□□□ -0.24
SSBP4-213ENST00000602088 MGMTP16455 207 aa13.56□□□□□ -0.24
SSBP4-213ENST00000602088 OMGP23515 440 aa13.56□□□□□ -0.24
SSBP4-213ENST00000602088 GDNFP39905 211 aa13.56□□□□□ -0.24
SSBP4-213ENST00000602088 FABP5Q01469 135 aa13.56□□□□□ -0.24
SSBP4-213ENST00000602088 DYNC1I2Q13409 638 aaKnown RBP13.56□□□□□ -0.24
SSBP4-213ENST00000602088 SSX1Q16384 188 aa13.56□□□□□ -0.24
SSBP4-213ENST00000602088 AANATQ16613 207 aa13.56□□□□□ -0.24
SSBP4-213ENST00000602088 LDLRAD2Q5SZI1 272 aa13.56□□□□□ -0.24
SSBP4-213ENST00000602088 ATAD3CQ5T2N8 411 aa13.56□□□□□ -0.24
SSBP4-213ENST00000602088 SLC35E4Q6ICL7 350 aa13.56□□□□□ -0.24
SSBP4-213ENST00000602088 BAIAP2L2Q6UXY1 529 aa13.56□□□□□ -0.24
SSBP4-213ENST00000602088 GDPGP1Q6ZNW5 385 aa13.56□□□□□ -0.24
SSBP4-213ENST00000602088 SPARTQ8N0X7 666 aa13.56□□□□□ -0.24
SSBP4-213ENST00000602088 DYNAPQ8N1N2 210 aa13.56□□□□□ -0.24
SSBP4-213ENST00000602088 SVOPQ8N4V2 548 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms