RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 PAX5Q02548 391 aa14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 SCN1BQ07699 218 aa14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 BNIP1Q12981 228 aa14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 KHDC1LQ5JSQ8 128 aa14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 ELP2Q6IA86 826 aa14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 UNQ9370/PRO34162Q6UXP9 181 aa14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 OR8H3Q8N146 312 aa14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 LINC00482Q8N8I6 264 aa14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 OR51T1Q8NGJ9 327 aa14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 OR13C3Q8NGS6 347 aa14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 J3QR06 171 aa14.15□□□□□ -0.14
SHKBP1-227ENST00000602011 J3QRE1 110 aa14.15□□□□□ -0.14
SHKBP1-227ENST00000602011 SLC33A1O00400 549 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-227ENST00000602011 TMEM225BP0DP42 221 aa14.15□□□□□ -0.14
SHKBP1-227ENST00000602011 CALCBP10092 127 aa14.15□□□□□ -0.14
SHKBP1-227ENST00000602011 MYCNOSP40205 109 aa14.15□□□□□ -0.14
SHKBP1-227ENST00000602011 OR3A4PP47883 348 aa14.15□□□□□ -0.14
SHKBP1-227ENST00000602011 SNRPGP62308 76 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-227ENST00000602011 MADCAM1Q13477 382 aa14.15□□□□□ -0.14
SHKBP1-227ENST00000602011 ALKBH1Q13686 389 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-227ENST00000602011 C17orf58Q2M2W7 97 aa14.15□□□□□ -0.14
SHKBP1-227ENST00000602011 C9orf152Q5JTZ5 239 aa14.15□□□□□ -0.14
SHKBP1-227ENST00000602011 AMIGO2Q86SJ2 522 aa14.15□□□□□ -0.14
SHKBP1-227ENST00000602011 PXT1Q8NFP0 134 aa14.15□□□□□ -0.14
SHKBP1-227ENST00000602011 TOMM40LQ969M1 308 aa14.15□□□□□ -0.14
SHKBP1-227ENST00000602011 ORC6Q9Y5N6 252 aa14.15□□□□□ -0.14
SHKBP1-227ENST00000602011 KIAA2026Q5HYC2 2103 aa14.15□□□□□ -0.14
SHKBP1-227ENST00000602011 WI2-2373I1.2A0A1W2PRP0 233 aa14.14□□□□□ -0.15
SHKBP1-227ENST00000602011 OR4C45A6NMZ5 311 aa14.14□□□□□ -0.15
SHKBP1-227ENST00000602011 NFYBP25208 207 aa14.14□□□□□ -0.15
SHKBP1-227ENST00000602011 RBM39Q14498 530 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-227ENST00000602011 KISS1Q15726 138 aa14.14□□□□□ -0.15
SHKBP1-227ENST00000602011 C1orf146Q5VVC0 180 aa14.14□□□□□ -0.15
SHKBP1-227ENST00000602011 BAIAP2L2Q6UXY1 529 aa14.14□□□□□ -0.15
SHKBP1-227ENST00000602011 MRPL41Q8IXM3 137 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-227ENST00000602011 PARP16Q8N5Y8 322 aa14.14□□□□□ -0.15
SHKBP1-227ENST00000602011 OR13C9Q8NGT0 318 aa14.14□□□□□ -0.15
SHKBP1-227ENST00000602011 RNFT2Q96EX2 444 aa14.14□□□□□ -0.15
SHKBP1-227ENST00000602011 COQ2Q96H96 371 aa14.14□□□□□ -0.15
SHKBP1-227ENST00000602011 KIRREL1Q96J84 757 aa14.14□□□□□ -0.15
SHKBP1-227ENST00000602011 B9D2Q9BPU9 175 aa14.14□□□□□ -0.15
SHKBP1-227ENST00000602011 GON7Q9BXV9 100 aa14.14□□□□□ -0.15
SHKBP1-227ENST00000602011 MYRFQ9Y2G1 1151 aa14.14□□□□□ -0.15
SHKBP1-227ENST00000602011 J3QLW9 94 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 EBAG9O00559 213 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 MAGEB3O15480 346 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 SULT1B1O43704 296 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 HCKP08631 526 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 ZNF19P17023 458 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 GZMHP20718 246 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 GDNFP39905 211 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 THBS3P49746 956 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 NANOS3P60323 173 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 KRTAP10-11P60412 298 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 RPL23AP62750 156 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 CD69Q07108 199 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 IL13RA2Q14627 380 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 CDK5R1Q15078 307 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 FOXRED2Q8IWF2 684 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 SYS1Q8N2H4 156 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 RFT1Q96AA3 541 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 IDI2-AS1Q9NZ38 188 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 OAZ3Q9UMX2 235 aa14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 EXOGQ9Y2C4 368 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-227ENST00000602011 MEIKINA0A087WXM9 373 aa14.12□□□□□ -0.15
SHKBP1-227ENST00000602011 TMEM212A6NML5 194 aa14.12□□□□□ -0.15
SHKBP1-227ENST00000602011 NPIPB11E5RHQ5 1161 aa14.12□□□□□ -0.15
SHKBP1-227ENST00000602011 RAMP3O60896 148 aa14.12□□□□□ -0.15
SHKBP1-227ENST00000602011 IL1AP01583 271 aa14.12□□□□□ -0.15
SHKBP1-227ENST00000602011 CCDC159P0C7I6 412 aa14.12□□□□□ -0.15
SHKBP1-227ENST00000602011 Q8NFD4 153 aa14.12□□□□□ -0.15
SHKBP1-227ENST00000602011 OR5D18Q8NGL1 313 aa14.12□□□□□ -0.15
SHKBP1-227ENST00000602011 CNIH3Q8TBE1 160 aa14.12□□□□□ -0.15
SHKBP1-227ENST00000602011 PELI1Q96FA3 418 aa14.12□□□□□ -0.15
SHKBP1-227ENST00000602011 CALYQ9NYX4 217 aa14.12□□□□□ -0.15
SHKBP1-227ENST00000602011 FAM172BPA6NC97 362 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 SERPINE3A8MV23 424 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 H0YJX3 145 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 IGHG2P01859 326 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 SNRNP70P08621 437 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 NHLRC4P0CG21 123 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 TMEM11P17152 192 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 ZP1P60852 638 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 EBI3Q14213 229 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 GALEQ14376 348 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 HES1Q14469 280 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 ATXN7L3Q14CW9 347 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 PAN3Q58A45 887 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 ZNF691Q5VV52 312 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 OR2W3Q7Z3T1 314 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 C5orf56Q8N8D9 126 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 OR51A4Q8NGJ6 313 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 Q96MT0 163 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 WWC2-AS2Q96NR7 200 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 SPACA5Q96QH8 159 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 ZNF649Q9BS31 505 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 PSG11Q9UQ72 335 aa14.11□□□□□ -0.15
SHKBP1-227ENST00000602011 CCRL2O00421 344 aa14.1□□□□□ -0.15
SHKBP1-227ENST00000602011 MPZL2O60487 215 aa14.1□□□□□ -0.15
SHKBP1-227ENST00000602011 FADS2O95864 444 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms