RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 FABP5Q01469 135 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 INSL4Q14641 139 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 HSD17B12Q53GQ0 312 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 HAGHLQ6PII5 290 aaPredicted RBP13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 UNQ9370/PRO34162Q6UXP9 181 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 LHFPL2Q6ZUX7 228 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 DNAAF1Q8NEP3 725 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 OR4M1Q8NGD0 313 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 PHYHIPQ92561 330 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 ORAI1Q96D31 301 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 CPNE2Q96FN4 548 aaPredicted RBP13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 EXOSC4Q9NPD3 245 aaKnown RBP13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 SSR3Q9UNL2 185 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 DNAH7Q8WXX0 4024 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 DYNC2H1Q8NCM8 4307 aaKnown RBP13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 IGKV1-9A0A0C4DH69 117 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 A0A1W2PRX2 142 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 PQLC2LA1A4F0 135 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 RFPL4AA6NLU0 287 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 RFPL4AL1F8VTS6 287 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 CD33P20138 364 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 BDKRB2P30411 391 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 HAAOP46952 286 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 CAPZA1P52907 286 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 LGALS4P56470 323 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 CD83Q01151 205 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 ZNF273Q14593 569 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 TMEM95Q3KNT9 176 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 SATL1Q86VE3 508 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 ZNF671Q8TAW3 534 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 TMEM138Q9NPI0 162 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 SCOCQ9UIL1 159 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 STUB1Q9UNE7 303 aa13.23□□□□□ -0.29
SHKBP1-215ENST00000597649 TRDV1A0A1B0GX56 115 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 GPX5O75715 221 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 CYB5AP00167 134 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 MAS1P04201 325 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 UCHL1P09936 223 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 FSTP19883 344 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 GALP22466 123 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 CEBPDP49716 269 aaPredicted RBP13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 DLX6P56179 175 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 TIMM50Q3ZCQ8 353 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 TCTEX1D4Q5JR98 221 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 ZNF782Q6ZMW2 699 aaPredicted RBP13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 TMEM91Q6ZNR0 172 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 ANGPTL5Q86XS5 388 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 AQP3Q92482 292 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 ZNF488Q96MN9 340 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 GPER1Q99527 375 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 OCSTAMPQ9BR26 566 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 PRSS22Q9GZN4 317 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 GSTK1Q9Y2Q3 226 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 RYR2Q92736 4967 aa13.22□□□□□ -0.29
SHKBP1-215ENST00000597649 TRAV8-7A0A075B6U6 113 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 J3QT63 122 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 SC5DO75845 299 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 ALDOBP05062 364 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 IGFBP3P17936 291 aaPredicted RBP13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 SRMP19623 302 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 MYL9P24844 172 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 PRDX2P32119 198 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 POU3F4P49335 361 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 DEFB121Q5J5C9 76 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 FAM27D1Q5T7N8 215 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 DDI2Q5TDH0 399 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 CD200R1LQ6Q8B3 271 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 ACP7Q6ZNF0 438 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 OR51A2Q8NGJ7 313 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 RFT1Q96AA3 541 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 SPACA5Q96QH8 159 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 CHCHD6Q9BRQ6 235 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 POLDIP2Q9Y2S7 368 aa13.21□□□□□ -0.29
SHKBP1-215ENST00000597649 LOC100506127A0A0U1RQW1 187 aa13.2□□□□□ -0.3
SHKBP1-215ENST00000597649 ODF3BA8MYP8 253 aa13.2□□□□□ -0.3
SHKBP1-215ENST00000597649 TMEM225BP0DP42 221 aa13.2□□□□□ -0.3
SHKBP1-215ENST00000597649 GADD45AP24522 165 aa13.2□□□□□ -0.3
SHKBP1-215ENST00000597649 CALRP27797 417 aaKnown RBP13.2□□□□□ -0.3
SHKBP1-215ENST00000597649 KISS1Q15726 138 aa13.2□□□□□ -0.3
SHKBP1-215ENST00000597649 SSX2Q16385 188 aa13.2□□□□□ -0.3
SHKBP1-215ENST00000597649 C22orf42Q6IC83 251 aa13.2□□□□□ -0.3
SHKBP1-215ENST00000597649 ZNF529Q6P280 563 aa13.2□□□□□ -0.3
SHKBP1-215ENST00000597649 GPR141Q7Z602 305 aa13.2□□□□□ -0.3
SHKBP1-215ENST00000597649 OR5AU1Q8NGC0 362 aa13.2□□□□□ -0.3
SHKBP1-215ENST00000597649 OR52N4Q8NGI2 321 aa13.2□□□□□ -0.3
SHKBP1-215ENST00000597649 PKIBQ9C010 78 aa13.2□□□□□ -0.3
SHKBP1-215ENST00000597649 OR51E2Q9H255 320 aa13.2□□□□□ -0.3
SHKBP1-215ENST00000597649 RASL12Q9NYN1 266 aa13.2□□□□□ -0.3
SHKBP1-215ENST00000597649 IGKV1-27A0A075B6S5 117 aa13.19□□□□□ -0.3
SHKBP1-215ENST00000597649 MEX3AA1L020 520 aaKnown RBP13.19□□□□□ -0.3
SHKBP1-215ENST00000597649 C17orf98A8MV24 154 aa13.19□□□□□ -0.3
SHKBP1-215ENST00000597649 ARG1P05089 322 aa13.19□□□□□ -0.3
SHKBP1-215ENST00000597649 ZNF93P35789 620 aaPredicted RBP13.19□□□□□ -0.3
SHKBP1-215ENST00000597649 GLT8D1Q68CQ7 371 aa13.19□□□□□ -0.3
SHKBP1-215ENST00000597649 SLC25A26Q70HW3 274 aa13.19□□□□□ -0.3
SHKBP1-215ENST00000597649 CALHM1Q8IU99 346 aa13.19□□□□□ -0.3
SHKBP1-215ENST00000597649 JAGN1Q8N5M9 183 aa13.19□□□□□ -0.3
SHKBP1-215ENST00000597649 NKAIN3Q8N8D7 197 aa13.19□□□□□ -0.3
SHKBP1-215ENST00000597649 OR5D18Q8NGL1 313 aa13.19□□□□□ -0.3
SHKBP1-215ENST00000597649 OR13F1Q8NGS4 319 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms