RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 IGHV2-26A0A0B4J1V2 119 aa13.75□□□□□ -0.21
RETREG3-210ENST00000590541 TMEM82A0PJX8 343 aa13.75□□□□□ -0.21
RETREG3-210ENST00000590541 H3BUI4 141 aa13.75□□□□□ -0.21
RETREG3-210ENST00000590541 MAGEB3O15480 346 aa13.75□□□□□ -0.21
RETREG3-210ENST00000590541 MED21Q13503 144 aa13.75□□□□□ -0.21
RETREG3-210ENST00000590541 RPL22L1Q6P5R6 122 aaKnown RBP13.75□□□□□ -0.21
RETREG3-210ENST00000590541 C18orf65Q6ZTR6 163 aa13.75□□□□□ -0.21
RETREG3-210ENST00000590541 OSR2Q8N2R0 312 aa13.75□□□□□ -0.21
RETREG3-210ENST00000590541 MUC7Q8TAX7 377 aa13.75□□□□□ -0.21
RETREG3-210ENST00000590541 AKR1E2Q96JD6 320 aa13.75□□□□□ -0.21
RETREG3-210ENST00000590541 UBE2J1Q9Y385 318 aaPredicted RBP13.75□□□□□ -0.21
RETREG3-210ENST00000590541 DNAH1Q9P2D7 4330 aa13.75□□□□□ -0.21
RETREG3-210ENST00000590541 DNAH7Q8WXX0 4024 aa13.74□□□□□ -0.21
RETREG3-210ENST00000590541 PSPNO60542 156 aa13.74□□□□□ -0.21
RETREG3-210ENST00000590541 WBP4O75554 376 aaKnown RBP13.74□□□□□ -0.21
RETREG3-210ENST00000590541 CD2P06729 351 aa13.74□□□□□ -0.21
RETREG3-210ENST00000590541 HCKP08631 526 aa13.74□□□□□ -0.21
RETREG3-210ENST00000590541 LIMS3P0CW19 117 aa13.74□□□□□ -0.21
RETREG3-210ENST00000590541 LIMS4P0CW20 117 aa13.74□□□□□ -0.21
RETREG3-210ENST00000590541 IL18R1Q13478 541 aa13.74□□□□□ -0.21
RETREG3-210ENST00000590541 EDDM3AQ14507 147 aa13.74□□□□□ -0.21
RETREG3-210ENST00000590541 KISS1Q15726 138 aa13.74□□□□□ -0.21
RETREG3-210ENST00000590541 ZNF691Q5VV52 312 aa13.74□□□□□ -0.21
RETREG3-210ENST00000590541 OR52N4Q8NGI2 321 aa13.74□□□□□ -0.21
RETREG3-210ENST00000590541 TSEN15Q8WW01 171 aaKnown RBP13.74□□□□□ -0.21
RETREG3-210ENST00000590541 ASCL2Q99929 193 aa13.74□□□□□ -0.21
RETREG3-210ENST00000590541 PDCD1LG2Q9BQ51 273 aa13.74□□□□□ -0.21
RETREG3-210ENST00000590541 SLC25A33Q9BSK2 321 aa13.74□□□□□ -0.21
RETREG3-210ENST00000590541 ZMAT5Q9UDW3 170 aaKnown RBP13.74□□□□□ -0.21
RETREG3-210ENST00000590541 GSTK1Q9Y2Q3 226 aa13.74□□□□□ -0.21
RETREG3-210ENST00000590541 IGKV1-12A0A0C4DH73 117 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 E9PI62 339 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 RAMP3O60896 148 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 OR2H2O95918 312 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 IGKV1D-12P01611 117 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 CSN2P05814 226 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 TMEM225BP0DP42 221 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 MYL12AP19105 171 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 RAB3AP20336 220 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 DUSP1P28562 367 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 P2RX3P56373 397 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 RPL23AP62750 156 aaKnown RBP13.73□□□□□ -0.21
RETREG3-210ENST00000590541 OR52W1Q6IF63 320 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 C8orf86Q6ZUL3 223 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 DHRSXQ8N5I4 330 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 PXT1Q8NFP0 134 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 OR4P4Q8NGL7 312 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 GPR148Q8TDV2 347 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 CORO2AQ92828 525 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 RFT1Q96AA3 541 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 RBM14Q96PK6 669 aaKnown RBP13.73□□□□□ -0.21
RETREG3-210ENST00000590541 P2RX4Q99571 388 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 CHST6Q9GZX3 395 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 GAL3ST2Q9H3Q3 398 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 TAS2R3Q9NYW6 316 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 IL36RNQ9UBH0 155 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 DIMT1Q9UNQ2 313 aaKnown RBP13.73□□□□□ -0.21
RETREG3-210ENST00000590541 EXOSC1Q9Y3B2 195 aaKnown RBP13.73□□□□□ -0.21
RETREG3-210ENST00000590541 SESN1Q9Y6P5 492 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 HSPE1-MOB4S4R3N1 261 aa13.73□□□□□ -0.21
RETREG3-210ENST00000590541 TRGV10A0A0A0MS01 117 aa13.72□□□□□ -0.21
RETREG3-210ENST00000590541 OR2F2O95006 317 aa13.72□□□□□ -0.21
RETREG3-210ENST00000590541 MYCNOSP40205 109 aa13.72□□□□□ -0.21
RETREG3-210ENST00000590541 OR3A1P47881 315 aa13.72□□□□□ -0.21
RETREG3-210ENST00000590541 MTNR1BP49286 362 aa13.72□□□□□ -0.21
RETREG3-210ENST00000590541 ZP1P60852 638 aa13.72□□□□□ -0.21
RETREG3-210ENST00000590541 CDK5R1Q15078 307 aa13.72□□□□□ -0.21
RETREG3-210ENST00000590541 ELP2Q6IA86 826 aa13.72□□□□□ -0.21
RETREG3-210ENST00000590541 ZNF529Q6P280 563 aa13.72□□□□□ -0.21
RETREG3-210ENST00000590541 ZNF329Q86UD4 541 aa13.72□□□□□ -0.21
RETREG3-210ENST00000590541 OR5D18Q8NGL1 313 aa13.72□□□□□ -0.21
RETREG3-210ENST00000590541 CAPSLQ8WWF8 208 aa13.72□□□□□ -0.21
RETREG3-210ENST00000590541 SPACA5Q96QH8 159 aa13.72□□□□□ -0.21
RETREG3-210ENST00000590541 PRR25Q96S07 402 aa13.72□□□□□ -0.21
RETREG3-210ENST00000590541 CHCHD3Q9NX63 227 aaKnown RBP13.72□□□□□ -0.21
RETREG3-210ENST00000590541 PSMB11A5LHX3 300 aa13.71□□□□□ -0.21
RETREG3-210ENST00000590541 ZNF44P15621 663 aa13.71□□□□□ -0.21
RETREG3-210ENST00000590541 HTR1DP28221 377 aa13.71□□□□□ -0.21
RETREG3-210ENST00000590541 SMN1Q16637 294 aaKnown RBP13.71□□□□□ -0.21
RETREG3-210ENST00000590541 OR2W3Q7Z3T1 314 aa13.71□□□□□ -0.21
RETREG3-210ENST00000590541 TRAPPC6BQ86SZ2 158 aa13.71□□□□□ -0.21
RETREG3-210ENST00000590541 RTN4RL2Q86UN3 420 aa13.71□□□□□ -0.21
RETREG3-210ENST00000590541 CYGBQ8WWM9 190 aa13.71□□□□□ -0.21
RETREG3-210ENST00000590541 CLEC7AQ9BXN2 247 aa13.71□□□□□ -0.21
RETREG3-210ENST00000590541 TMEM133Q9H2Q1 129 aa13.71□□□□□ -0.21
RETREG3-210ENST00000590541 BABAM2Q9NXR7 383 aa13.71□□□□□ -0.21
RETREG3-210ENST00000590541 LCE6AA0A183 80 aa13.7□□□□□ -0.22
RETREG3-210ENST00000590541 SIRPB1O00241 398 aa13.7□□□□□ -0.22
RETREG3-210ENST00000590541 DEGS1O15121 323 aa13.7□□□□□ -0.22
RETREG3-210ENST00000590541 OGG1O15527 345 aa13.7□□□□□ -0.22
RETREG3-210ENST00000590541 MMP23AO75900 390 aa13.7□□□□□ -0.22
RETREG3-210ENST00000590541 ETV1P50549 477 aa13.7□□□□□ -0.22
RETREG3-210ENST00000590541 GTF2A1P52655 376 aaPredicted RBP13.7□□□□□ -0.22
RETREG3-210ENST00000590541 SNU13P55769 128 aaKnown RBP13.7□□□□□ -0.22
RETREG3-210ENST00000590541 LRRC36Q1X8D7 754 aa13.7□□□□□ -0.22
RETREG3-210ENST00000590541 C9orf152Q5JTZ5 239 aa13.7□□□□□ -0.22
RETREG3-210ENST00000590541 HEPN1Q6WQI6 88 aa13.7□□□□□ -0.22
RETREG3-210ENST00000590541 TPRX1Q8N7U7 411 aa13.7□□□□□ -0.22
RETREG3-210ENST00000590541 OR52N1Q8NH53 320 aa13.7□□□□□ -0.22
RETREG3-210ENST00000590541 CNIH3Q8TBE1 160 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms