RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 APCP25054 2843 aa7.96□□□□□ -1.14
VPS25-205ENST00000590339 IGLV3-9A0A075B6K5 115 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 TRAV24A0A0B4J272 114 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.95□□□□□ -1.14
VPS25-205ENST00000590339 C9orf170A2RU37 121 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 OR5H14A6NHG9 310 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 H0YL77 283 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 M0R1B8 84 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 SDCBPO00560 298 aaPredicted RBP7.95□□□□□ -1.14
VPS25-205ENST00000590339 TIMM8AO60220 97 aaPredicted RBP7.95□□□□□ -1.14
VPS25-205ENST00000590339 HLA-AP01891 365 aaKnown RBP7.95□□□□□ -1.14
VPS25-205ENST00000590339 RPS2P15880 293 aaKnown RBP7.95□□□□□ -1.14
VPS25-205ENST00000590339 PPP3CBP16298 524 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 HLA-GP17693 338 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 GCH1P30793 250 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 GLRXP35754 106 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 OR3A3P47888 321 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 ARPC4P59998 168 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 IKZF1Q13422 519 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 Q5BKY6 102 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 LY6G6FQ5SQ64 297 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 RGS7BPQ6MZT1 257 aaPredicted RBP7.95□□□□□ -1.14
VPS25-205ENST00000590339 LPCAT3Q6P1A2 487 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 ZNF880Q6PDB4 577 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 SSX8Q7RTT4 187 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 SPERTQ8NA61 448 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 ADAD2Q8NCV1 583 aaKnown RBP7.95□□□□□ -1.14
VPS25-205ENST00000590339 OR11H4Q8NGC9 324 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 OR5M8Q8NGP6 311 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 MITD1Q8WV92 249 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 MUCL1Q96DR8 90 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 PIK3IP1Q96FE7 263 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 SCGB3A2Q96PL1 93 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 DHRS9Q9BPW9 319 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 ZNF442Q9H7R0 627 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 PLSCR3Q9NRY6 295 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 TMEM100Q9NV29 134 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 NECAP2Q9NVZ3 263 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 OPN4Q9UHM6 478 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 PRR14LQ5THK1 2151 aa7.95□□□□□ -1.14
VPS25-205ENST00000590339 A0A0B4J2A0 478 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 A0A1W2PPR1 153 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 FAM172BPA6NC97 362 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 DBX1A6NMT0 343 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 POM121CA8CG34 1229 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 GOSR2O14653 212 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 DUS4LO95620 317 aaKnown RBP7.94□□□□□ -1.14
VPS25-205ENST00000590339 IGHV3-13P01766 116 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 OR5H8P0DN80 308 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 CD200P41217 278 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 NPY4RP50391 375 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 H2BFSP57053 126 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 TSPAN5P62079 268 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 RPS23P62266 143 aaKnown RBP7.94□□□□□ -1.14
VPS25-205ENST00000590339 ZNF146Q15072 292 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 PDCD1Q15116 288 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 SPIN3Q5JUX0 258 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 BRICD5Q6PL45 260 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 SLC22A25Q6T423 547 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 DHRS11Q6UWP2 260 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 SPNS3Q6ZMD2 512 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 C22orf34Q6ZV56 151 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 C11orf53Q8IXP5 236 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 GAPTQ8N292 157 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 SUMF2Q8NBJ7 301 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 OR2T35Q8NGX2 323 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 MRPL30Q8TCC3 161 aaKnown RBP7.94□□□□□ -1.14
VPS25-205ENST00000590339 TMEM171Q8WVE6 324 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 RTBDNQ9BSG5 229 aaPredicted RBP7.94□□□□□ -1.14
VPS25-205ENST00000590339 TMPRSS13Q9BYE2 586 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 PLEKHF2Q9H8W4 249 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 Q9N2K0 584 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 SHPKQ9UHJ6 478 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 BOLA1Q9Y3E2 137 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 PDZD2O15018 2839 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 LRBAP50851 2863 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 POLQO75417 2590 aa7.94□□□□□ -1.14
VPS25-205ENST00000590339 CSMD2Q7Z408 3487 aa7.93□□□□□ -1.14
VPS25-205ENST00000590339 MCRIP1C9JLW8 97 aa7.93□□□□□ -1.14
VPS25-205ENST00000590339 ATP6V1G2-DDX39BF2Z307 99 aa7.93□□□□□ -1.14
VPS25-205ENST00000590339 F5H5P2 479 aa7.93□□□□□ -1.14
VPS25-205ENST00000590339 RGS11O94810 467 aa7.93□□□□□ -1.14
VPS25-205ENST00000590339 SFT2D2O95562 160 aa7.93□□□□□ -1.14
VPS25-205ENST00000590339 CRYAAP02489 173 aa7.93□□□□□ -1.14
VPS25-205ENST00000590339 THBDP07204 575 aa7.93□□□□□ -1.14
VPS25-205ENST00000590339 CTSDP07339 412 aaPredicted RBP7.93□□□□□ -1.14
VPS25-205ENST00000590339 CD40P25942 277 aa7.93□□□□□ -1.14
VPS25-205ENST00000590339 CD34P28906 385 aa7.93□□□□□ -1.14
VPS25-205ENST00000590339 MDH2P40926 338 aaKnown RBP7.93□□□□□ -1.14
VPS25-205ENST00000590339 SUPT4H1P63272 117 aaKnown RBP7.93□□□□□ -1.14
VPS25-205ENST00000590339 MZT1Q08AG7 82 aa7.93□□□□□ -1.14
VPS25-205ENST00000590339 TMEM128Q5BJH2 165 aa7.93□□□□□ -1.14
VPS25-205ENST00000590339 DCAF12L2Q5VW00 463 aa7.93□□□□□ -1.14
VPS25-205ENST00000590339 NUP37Q8NFH4 326 aa7.93□□□□□ -1.14
VPS25-205ENST00000590339 NINJ1Q92982 152 aa7.93□□□□□ -1.14
VPS25-205ENST00000590339 MOB3AQ96BX8 217 aa7.93□□□□□ -1.14
VPS25-205ENST00000590339 WDR89Q96FK6 387 aaPredicted RBP7.93□□□□□ -1.14
VPS25-205ENST00000590339 FOXC2Q99958 501 aa7.93□□□□□ -1.14
VPS25-205ENST00000590339 ZNF2Q9BSG1 426 aaPredicted RBP7.93□□□□□ -1.14
VPS25-205ENST00000590339 DPCDQ9BVM2 203 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms