RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 CRIM1Q9NZV1 1036 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 FREM1Q5H8C1 2179 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 ARHGAP21Q5T5U3 1957 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 RTTNQ86VV8 2226 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 TRAV14DV4A0A0A6YYC5 116 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 C13orf42A0A1B0GVH6 325 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 A0A1B0GW55 424 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 A8MXE2 369 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 FAM25EA8MYX2 175 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 NPIPB11E5RHQ5 1161 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 TIMM8AO60220 97 aaPredicted RBP8.84□□□□□ -0.99
VPS25-203ENST00000589520 AGFG2O95081 481 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 KNG1P01042 644 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 CRYAAP02489 173 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 DUX4L2P0CJ85 424 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 DUX4L3P0CJ86 424 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 DUX4L4P0CJ87 422 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 DUX4L5P0CJ88 424 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 DUX4L6P0CJ89 424 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 DUX4L7P0CJ90 424 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 GLI4P10075 376 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 LMO1P25800 156 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 GLRXP35754 106 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 HTR2BP41595 481 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 AP2S1P53680 142 aaPredicted RBP8.84□□□□□ -0.99
VPS25-203ENST00000589520 PIGPP57054 158 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 TMPRSS3P57727 454 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 SELENOVP59797 346 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 NAAAQ02083 359 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 DAZAP2Q15038 168 aaPredicted RBP8.84□□□□□ -0.99
VPS25-203ENST00000589520 CLLU1Q5K131 121 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 Q6P435 159 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 ZNF474Q6S9Z5 364 aaPredicted RBP8.84□□□□□ -0.99
VPS25-203ENST00000589520 MRGPRGQ86SM5 289 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 MYPOPQ86VE0 399 aaPredicted RBP8.84□□□□□ -0.99
VPS25-203ENST00000589520 SLC7A5P1Q8MH63 180 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 GAPTQ8N292 157 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 KCNRGQ8N5I3 272 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 OR10Z1Q8NGY1 313 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 CCDC120Q96HB5 630 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 SEC22AQ96IW7 307 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 HES4Q9HCC6 221 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 DUX4Q9UBX2 424 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 FBXO9Q9UK97 447 aaPredicted RBP8.84□□□□□ -0.99
VPS25-203ENST00000589520 TNFSF18Q9UNG2 199 aa8.84□□□□□ -0.99
VPS25-203ENST00000589520 TRAV24A0A0B4J272 114 aa8.83□□□□□ -1
VPS25-203ENST00000589520 KANTRA0A1W2PQU2 76 aa8.83□□□□□ -1
VPS25-203ENST00000589520 LINC00862A6NCI5 91 aa8.83□□□□□ -1
VPS25-203ENST00000589520 EEF1E1-BLOC1S5C9J1V9 151 aa8.83□□□□□ -1
VPS25-203ENST00000589520 F8VVB4 439 aa8.83□□□□□ -1
VPS25-203ENST00000589520 F8VWA3 439 aa8.83□□□□□ -1
VPS25-203ENST00000589520 IFNL4K9M1U5 179 aa8.83□□□□□ -1
VPS25-203ENST00000589520 LILRA1O75019 489 aa8.83□□□□□ -1
VPS25-203ENST00000589520 TUSC2O75896 110 aa8.83□□□□□ -1
VPS25-203ENST00000589520 NXPH2O95156 264 aa8.83□□□□□ -1
VPS25-203ENST00000589520 MPC2O95563 127 aa8.83□□□□□ -1
VPS25-203ENST00000589520 PPYP01298 95 aa8.83□□□□□ -1
VPS25-203ENST00000589520 RLN2P04090 185 aa8.83□□□□□ -1
VPS25-203ENST00000589520 LYL1P12980 280 aa8.83□□□□□ -1
VPS25-203ENST00000589520 ZNF44P15621 663 aa8.83□□□□□ -1
VPS25-203ENST00000589520 ZNF250P15622 560 aa8.83□□□□□ -1
VPS25-203ENST00000589520 SSTR2P30874 369 aa8.83□□□□□ -1
VPS25-203ENST00000589520 CD200P41217 278 aa8.83□□□□□ -1
VPS25-203ENST00000589520 TDGF1P3P51864 188 aa8.83□□□□□ -1
VPS25-203ENST00000589520 UBA52P62987 128 aaKnown RBP8.83□□□□□ -1
VPS25-203ENST00000589520 ZNF154Q13106 437 aa8.83□□□□□ -1
VPS25-203ENST00000589520 EXOSC2Q13868 293 aaKnown RBP8.83□□□□□ -1
VPS25-203ENST00000589520 SLC9A3R2Q15599 337 aa8.83□□□□□ -1
VPS25-203ENST00000589520 TSC22D1Q15714 1073 aa8.83□□□□□ -1
VPS25-203ENST00000589520 ANKRD55Q3KP44 614 aa8.83□□□□□ -1
VPS25-203ENST00000589520 PRSS54Q6PEW0 395 aa8.83□□□□□ -1
VPS25-203ENST00000589520 BRICD5Q6PL45 260 aa8.83□□□□□ -1
VPS25-203ENST00000589520 FAM90A1Q86YD7 464 aa8.83□□□□□ -1
VPS25-203ENST00000589520 LGI3Q8N145 548 aa8.83□□□□□ -1
VPS25-203ENST00000589520 ZNF565Q8N9K5 539 aa8.83□□□□□ -1
VPS25-203ENST00000589520 PRR7Q8TB68 274 aa8.83□□□□□ -1
VPS25-203ENST00000589520 MRPL30Q8TCC3 161 aaKnown RBP8.83□□□□□ -1
VPS25-203ENST00000589520 SCARB1Q8WTV0 552 aa8.83□□□□□ -1
VPS25-203ENST00000589520 RTN4IP1Q8WWV3 396 aaPredicted RBP8.83□□□□□ -1
VPS25-203ENST00000589520 DNAJB11Q9UBS4 358 aa8.83□□□□□ -1
VPS25-203ENST00000589520 KIF25Q9UIL4 384 aa8.83□□□□□ -1
VPS25-203ENST00000589520 TP53TG5Q9Y2B4 290 aa8.83□□□□□ -1
VPS25-203ENST00000589520 ZNF835Q9Y2P0 537 aa8.83□□□□□ -1
VPS25-203ENST00000589520 TMED3Q9Y3Q3 217 aa8.83□□□□□ -1
VPS25-203ENST00000589520 LAMA5O15230 3695 aa8.83□□□□□ -1
VPS25-203ENST00000589520 MED12LQ86YW9 2145 aa8.83□□□□□ -1
VPS25-203ENST00000589520 DUXBA0A1W2PPF3 345 aa8.82□□□□□ -1
VPS25-203ENST00000589520 K7EM74 188 aa8.82□□□□□ -1
VPS25-203ENST00000589520 GPR31O00270 319 aa8.82□□□□□ -1
VPS25-203ENST00000589520 CDIPTO14735 213 aa8.82□□□□□ -1
VPS25-203ENST00000589520 RHBDL1O75783 438 aa8.82□□□□□ -1
VPS25-203ENST00000589520 PTBP3O95758 552 aaKnown RBP8.82□□□□□ -1
VPS25-203ENST00000589520 IGHV3-13P01766 116 aa8.82□□□□□ -1
VPS25-203ENST00000589520 WNT2P09544 360 aa8.82□□□□□ -1
VPS25-203ENST00000589520 AADACP22760 399 aa8.82□□□□□ -1
VPS25-203ENST00000589520 CFHR2P36980 270 aa8.82□□□□□ -1
VPS25-203ENST00000589520 MPV17P39210 176 aa8.82□□□□□ -1
VPS25-203ENST00000589520 ERVS71-1P61550 626 aa8.82□□□□□ -1
VPS25-203ENST00000589520 EIF5AP63241 154 aaKnown RBP8.82□□□□□ -1
VPS25-203ENST00000589520 BAMBIQ13145 260 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms