RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 CACNG8Q8WXS5 425 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 ZNF396Q96N95 335 aaPredicted RBP1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 VAT1Q99536 393 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 B9D2Q9BPU9 175 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 NXF2Q9GZY0 626 aaKnown RBP1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 SDHAF2Q9NX18 166 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 DNAJC27Q9NZQ0 273 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 CCL26Q9Y258 94 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 BTRCQ9Y297 605 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 NRCAMQ92823 1304 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 AQRO60306 1485 aaKnown RBP eCLIP1.37□□□□□ -2.193e-6■□□□□ 11
SMCHD1-207ENST00000581711 ICE1Q9Y2F5 2266 aa1.37□□□□□ -2.19
SMCHD1-207ENST00000581711 F5H5T6 163 aa1.37□□□□□ -2.19
SMCHD1-207ENST00000581711 EEF1E1O43324 174 aaKnown RBP1.37□□□□□ -2.19
SMCHD1-207ENST00000581711 KDELR3O43731 214 aa1.37□□□□□ -2.19
SMCHD1-207ENST00000581711 POP7O75817 140 aaKnown RBP1.37□□□□□ -2.19
SMCHD1-207ENST00000581711 PSMB9P28065 219 aa1.37□□□□□ -2.19
SMCHD1-207ENST00000581711 ZNF140P52738 457 aaPredicted RBP1.37□□□□□ -2.19
SMCHD1-207ENST00000581711 HES1Q14469 280 aa1.37□□□□□ -2.19
SMCHD1-207ENST00000581711 CEACAM21Q3KPI0 293 aa1.37□□□□□ -2.19
SMCHD1-207ENST00000581711 PYCR3Q53H96 274 aa1.37□□□□□ -2.19
SMCHD1-207ENST00000581711 C6orf183Q5T699 404 aa1.37□□□□□ -2.19
SMCHD1-207ENST00000581711 REEP6Q96HR9 211 aa1.37□□□□□ -2.19
SMCHD1-207ENST00000581711 ARL6Q9H0F7 186 aa1.37□□□□□ -2.19
SMCHD1-207ENST00000581711 KCNIP2Q9NS61 270 aa1.37□□□□□ -2.19
SMCHD1-207ENST00000581711 LINC00588Q9Y4M8 146 aa1.37□□□□□ -2.19
SMCHD1-207ENST00000581711 PHLDA3Q9Y5J5 127 aa1.37□□□□□ -2.19
SMCHD1-207ENST00000581711 OTOFQ9HC10 1997 aa1.37□□□□□ -2.19
SMCHD1-207ENST00000581711 STRCP1A6NGW2 1772 aa1.36□□□□□ -2.19
SMCHD1-207ENST00000581711 YLPM1P49750 1951 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-207ENST00000581711 PGPA6NDG6 321 aa1.36□□□□□ -2.19
SMCHD1-207ENST00000581711 RFXANKO14593 260 aa1.36□□□□□ -2.19
SMCHD1-207ENST00000581711 PRMT5O14744 637 aaPredicted RBP1.36□□□□□ -2.19
SMCHD1-207ENST00000581711 GUSBP08236 651 aa1.36□□□□□ -2.19
SMCHD1-207ENST00000581711 STX4Q12846 297 aa1.36□□□□□ -2.19
SMCHD1-207ENST00000581711 GATD1Q8NB37 220 aa1.36□□□□□ -2.19
SMCHD1-207ENST00000581711 TXNDC17Q9BRA2 123 aa1.36□□□□□ -2.19
SMCHD1-207ENST00000581711 TTTY12Q9BZ98 90 aa1.36□□□□□ -2.19
SMCHD1-207ENST00000581711 AICDAQ9GZX7 198 aa1.36□□□□□ -2.19
SMCHD1-207ENST00000581711 GAL3ST2Q9H3Q3 398 aa1.36□□□□□ -2.19
SMCHD1-207ENST00000581711 TAS2R9Q9NYW1 312 aa1.36□□□□□ -2.19
SMCHD1-207ENST00000581711 RPUSD1Q9UJJ7 312 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-207ENST00000581711 KMT2BQ9UMN6 2715 aaPredicted RBP1.36□□□□□ -2.19
SMCHD1-207ENST00000581711 POLR3AO14802 1390 aaPredicted RBP1.35□□□□□ -2.19
SMCHD1-207ENST00000581711 ATRNO75882 1429 aa1.35□□□□□ -2.19
SMCHD1-207ENST00000581711 KIF27Q86VH2 1401 aa1.35□□□□□ -2.19
SMCHD1-207ENST00000581711 TP53I11O14683 189 aa1.35□□□□□ -2.19
SMCHD1-207ENST00000581711 SPOPO43791 374 aa1.35□□□□□ -2.19
SMCHD1-207ENST00000581711 SC5DO75845 299 aa1.35□□□□□ -2.19
SMCHD1-207ENST00000581711 GYPCP04921 128 aa1.35□□□□□ -2.19
SMCHD1-207ENST00000581711 PSKH1P11801 424 aa1.35□□□□□ -2.19
SMCHD1-207ENST00000581711 ZCWPW2Q504Y3 356 aa1.35□□□□□ -2.19
SMCHD1-207ENST00000581711 ACTL10Q5JWF8 245 aa1.35□□□□□ -2.19
SMCHD1-207ENST00000581711 RESP18Q5W5W9 173 aa1.35□□□□□ -2.19
SMCHD1-207ENST00000581711 C10orf107Q8IVU9 208 aa1.35□□□□□ -2.19
SMCHD1-207ENST00000581711 FER1L6-AS1Q8NA97 138 aa1.35□□□□□ -2.19
SMCHD1-207ENST00000581711 DOK4Q8TEW6 326 aa1.35□□□□□ -2.19
SMCHD1-207ENST00000581711 HIST1H2BAQ96A08 127 aa1.35□□□□□ -2.19
SMCHD1-207ENST00000581711 CMBLQ96DG6 245 aa1.35□□□□□ -2.19
SMCHD1-207ENST00000581711 NCOR1P1Q9H4R4 102 aa1.35□□□□□ -2.19
SMCHD1-207ENST00000581711 ZNF189O75820 626 aaPredicted RBP1.34□□□□□ -2.19
SMCHD1-207ENST00000581711 SNAI1O95863 264 aaPredicted RBP1.34□□□□□ -2.19
SMCHD1-207ENST00000581711 STAG3L2P0CL84 134 aa1.34□□□□□ -2.19
SMCHD1-207ENST00000581711 ELK4P28324 431 aa1.34□□□□□ -2.19
SMCHD1-207ENST00000581711 BLVRBP30043 206 aaPredicted RBP1.34□□□□□ -2.19
SMCHD1-207ENST00000581711 GCLMP48507 274 aa1.34□□□□□ -2.19
SMCHD1-207ENST00000581711 APOFQ13790 326 aa1.34□□□□□ -2.19
SMCHD1-207ENST00000581711 WDR43Q15061 677 aaKnown RBP eCLIP1.34□□□□□ -2.19
SMCHD1-207ENST00000581711 GOLGA7BQ2TAP0 167 aa1.34□□□□□ -2.19
SMCHD1-207ENST00000581711 ZIC4Q8N9L1 334 aa1.34□□□□□ -2.19
SMCHD1-207ENST00000581711 OR10P1Q8NGE3 313 aa1.34□□□□□ -2.19
SMCHD1-207ENST00000581711 OR6N2Q8NGY6 317 aa1.34□□□□□ -2.19
SMCHD1-207ENST00000581711 BCL7BQ9BQE9 202 aa1.34□□□□□ -2.19
SMCHD1-207ENST00000581711 MFSD1Q9H3U5 465 aa1.34□□□□□ -2.19
SMCHD1-207ENST00000581711 VPREB3Q9UKI3 123 aa1.34□□□□□ -2.19
SMCHD1-207ENST00000581711 CEP170Q5SW79 1584 aa1.34□□□□□ -2.2
SMCHD1-207ENST00000581711 TRPM6Q9BX84 2022 aa1.33□□□□□ -2.2
SMCHD1-207ENST00000581711 IGHV2-26A0A0B4J1V2 119 aa1.33□□□□□ -2.2
SMCHD1-207ENST00000581711 ODF3BA8MYP8 253 aa1.33□□□□□ -2.2
SMCHD1-207ENST00000581711 ZNF3P17036 446 aa1.33□□□□□ -2.2
SMCHD1-207ENST00000581711 CRABP1P29762 137 aa1.33□□□□□ -2.2
SMCHD1-207ENST00000581711 RAB38P57729 211 aa1.33□□□□□ -2.2
SMCHD1-207ENST00000581711 TMEM176BQ3YBM2 270 aaPredicted RBP1.33□□□□□ -2.2
SMCHD1-207ENST00000581711 KRTCAP2Q8N6L1 136 aa1.33□□□□□ -2.2
SMCHD1-207ENST00000581711 FAM184AQ8NB25 1140 aa1.33□□□□□ -2.2
SMCHD1-207ENST00000581711 KCTD4Q8WVF5 259 aa1.33□□□□□ -2.2
SMCHD1-207ENST00000581711 NELFBQ8WX92 580 aa1.33□□□□□ -2.2
SMCHD1-207ENST00000581711 BIRC8Q96P09 236 aa1.33□□□□□ -2.2
SMCHD1-207ENST00000581711 TM6SF2Q9BZW4 377 aa1.33□□□□□ -2.2
SMCHD1-207ENST00000581711 DIABLOQ9NR28 239 aa1.33□□□□□ -2.2
SMCHD1-207ENST00000581711 STMN3Q9NZ72 180 aa1.33□□□□□ -2.2
SMCHD1-207ENST00000581711 VAPAQ9P0L0 249 aa1.33□□□□□ -2.2
SMCHD1-207ENST00000581711 MPDZO75970 2070 aa1.33□□□□□ -2.2
SMCHD1-207ENST00000581711 LOC102725191A0A1B0GVB3 256 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 TCF21O43680 179 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 CA2P00918 260 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 CRYGCP07315 174 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 DEKP35659 375 aaKnown RBP1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 C2orf80Q0P641 193 aa1.32□□□□□ -2.2
SMCHD1-207ENST00000581711 MMDQ15546 238 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms