RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 SDHAF1A6NFY7 115 aa2.4□□□□□ -2.03
LINC00557-201ENST00000563184 TCF21O43680 179 aa2.4□□□□□ -2.03
LINC00557-201ENST00000563184 SPOPO43791 374 aa2.4□□□□□ -2.03
LINC00557-201ENST00000563184 PDCD6O75340 191 aa2.4□□□□□ -2.03
LINC00557-201ENST00000563184 PDYNP01213 254 aa2.4□□□□□ -2.03
LINC00557-201ENST00000563184 LAIR2Q6ISS4 152 aa2.4□□□□□ -2.03
LINC00557-201ENST00000563184 SSX6Q7RTT6 188 aa2.4□□□□□ -2.03
LINC00557-201ENST00000563184 OR5P3Q8WZ94 311 aa2.4□□□□□ -2.03
LINC00557-201ENST00000563184 PITX2Q99697 317 aa2.4□□□□□ -2.03
LINC00557-201ENST00000563184 MAT2BQ9NZL9 334 aa2.4□□□□□ -2.03
LINC00557-201ENST00000563184 IGHV2-26A0A0B4J1V2 119 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 A0A1W2PNM2 257 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 A6NED7 52 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 C3orf84H3BNL1 204 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 PLPP3O14495 311 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 CST4P01036 141 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 SLC2A1P11166 492 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 MAGEA3P43357 314 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 GZMMP51124 257 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 UBE2KP61086 200 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 HBG1P69891 147 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 HBG2P69892 147 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 TRAM1Q15629 374 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 TRIP13Q15645 432 aaPredicted RBP2.39□□□□□ -2.03
LINC00557-201ENST00000563184 BCL2A1Q16548 175 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 PSG3Q16557 428 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 GOLGA7BQ2TAP0 167 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 AADACL4Q5VUY2 407 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 ELP2Q6IA86 826 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 GATD1Q8NB37 220 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 ZNF738Q8NE65 137 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 B9D2Q9BPU9 175 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 IFT46Q9NQC8 304 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 AGPAT3Q9NRZ7 376 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 POFUT2Q9Y2G5 429 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 USH1CQ9Y6N9 552 aa2.39□□□□□ -2.03
LINC00557-201ENST00000563184 POP7O75817 140 aaKnown RBP2.38□□□□□ -2.03
LINC00557-201ENST00000563184 TSPAN5P62079 268 aa2.38□□□□□ -2.03
LINC00557-201ENST00000563184 CD164Q04900 197 aa2.38□□□□□ -2.03
LINC00557-201ENST00000563184 PRDX1Q06830 199 aaKnown RBP2.38□□□□□ -2.03
LINC00557-201ENST00000563184 CLEC20AQ6ZU45 233 aa2.38□□□□□ -2.03
LINC00557-201ENST00000563184 C10orf107Q8IVU9 208 aa2.38□□□□□ -2.03
LINC00557-201ENST00000563184 APOL4Q9BPW4 351 aa2.38□□□□□ -2.03
LINC00557-201ENST00000563184 MRM2Q9UI43 246 aaKnown RBP2.38□□□□□ -2.03
LINC00557-201ENST00000563184 BTRCQ9Y297 605 aa2.38□□□□□ -2.03
LINC00557-201ENST00000563184 BRD4O60885 1362 aaPredicted RBP2.37□□□□□ -2.03
LINC00557-201ENST00000563184 MYO16Q9Y6X6 1858 aa2.37□□□□□ -2.03
LINC00557-201ENST00000563184 A0A1B0GTI1 187 aa2.37□□□□□ -2.03
LINC00557-201ENST00000563184 OR5H14A6NHG9 310 aa2.37□□□□□ -2.03
LINC00557-201ENST00000563184 SLC31A1O15431 190 aa2.37□□□□□ -2.03
LINC00557-201ENST00000563184 CDS2O95674 445 aa2.37□□□□□ -2.03
LINC00557-201ENST00000563184 S100A2P29034 98 aa2.37□□□□□ -2.03
LINC00557-201ENST00000563184 CRABP2P29373 138 aa2.37□□□□□ -2.03
LINC00557-201ENST00000563184 FUSP35637 526 aaKnown RBP eCLIP2.37□□□□□ -2.03
LINC00557-201ENST00000563184 ETV1P50549 477 aa2.37□□□□□ -2.03
LINC00557-201ENST00000563184 AQP5P55064 265 aa2.37□□□□□ -2.03
LINC00557-201ENST00000563184 RAB25P57735 213 aa2.37□□□□□ -2.03
LINC00557-201ENST00000563184 LYZL2Q7Z4W2 148 aa2.37□□□□□ -2.03
LINC00557-201ENST00000563184 SLC25A45Q8N413 288 aa2.37□□□□□ -2.03
LINC00557-201ENST00000563184 TRIML2Q8N7C3 387 aa2.37□□□□□ -2.03
LINC00557-201ENST00000563184 TMEM239Q8WW34 195 aa2.37□□□□□ -2.03
LINC00557-201ENST00000563184 GOLPH3Q9H4A6 298 aa2.37□□□□□ -2.03
LINC00557-201ENST00000563184 STK38LQ9Y2H1 464 aa2.37□□□□□ -2.03
LINC00557-201ENST00000563184 TBL2Q9Y4P3 447 aaKnown RBP2.37□□□□□ -2.03
LINC00557-201ENST00000563184 LOC100506127A0A0U1RQW1 187 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 FAM183AA6NL82 134 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 F8VP50 259 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 J3QRE1 110 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 UBDO15205 165 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 EVI2BP34910 448 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 RPA3P35244 121 aaPredicted RBP2.36□□□□□ -2.03
LINC00557-201ENST00000563184 KRTAP12-4P60329 112 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 Q3ZCU0 254 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 LAMTOR1Q6IAA8 161 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 FAM183BPQ6ZVS7 135 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 AHSA2Q719I0 299 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 TMEM25Q86YD3 366 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 RAD51AP1Q96B01 352 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 TMIGD2Q96BF3 282 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 REEP6Q96HR9 211 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 CATSPER2Q96P56 530 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 HIGD2AQ9BW72 106 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 TAS2R13Q9NYV9 303 aa2.36□□□□□ -2.03
LINC00557-201ENST00000563184 RNASEK-C17orf49H0YIS7 233 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 TMEM250H0YL14 139 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 PSCAO43653 123 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 GPR75O95800 540 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 OPN1SWP03999 348 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 CTSGP08311 255 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 TPM1P09493 284 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 ZNF22P17026 224 aaPredicted RBP2.35□□□□□ -2.03
LINC00557-201ENST00000563184 RHOAP61586 193 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 BSXQ3C1V8 233 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 ZCWPW2Q504Y3 356 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 DGAT2L6Q6ZPD8 337 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 FAM19A3Q7Z5A8 133 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 HS3ST5Q8IZT8 346 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 OR4A5Q8NH83 315 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 CASTOR1Q8WTX7 329 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 CMBLQ96DG6 245 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms