RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 ZNF660Q6AZW8 331 aaPredicted RBP8□□□□□ -1.13
LINC00838-201ENST00000562956 TMEM211Q6ICI0 200 aa8□□□□□ -1.13
LINC00838-201ENST00000562956 SLC22A25Q6T423 547 aa8□□□□□ -1.13
LINC00838-201ENST00000562956 UNQ6126/PRO20091Q6UXV3 157 aa8□□□□□ -1.13
LINC00838-201ENST00000562956 C22orf34Q6ZV56 151 aa8□□□□□ -1.13
LINC00838-201ENST00000562956 FAM58AQ8N1B3 248 aa8□□□□□ -1.13
LINC00838-201ENST00000562956 OR8G5Q8NG78 346 aa8□□□□□ -1.13
LINC00838-201ENST00000562956 CASTOR1Q8WTX7 329 aa8□□□□□ -1.13
LINC00838-201ENST00000562956 MITD1Q8WV92 249 aa8□□□□□ -1.13
LINC00838-201ENST00000562956 BCL2L14Q9BZR8 327 aa8□□□□□ -1.13
LINC00838-201ENST00000562956 TMEM100Q9NV29 134 aa8□□□□□ -1.13
LINC00838-201ENST00000562956 GRPP07492 148 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 FLI1Q01543 452 aaPredicted RBP7.99□□□□□ -1.13
LINC00838-201ENST00000562956 MPPED2Q15777 294 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 TMEM128Q5BJH2 165 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 Q6ZR03 302 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 TMEM185AQ8NFB2 350 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 NECAP2Q9NVZ3 263 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 ZNF835Q9Y2P0 537 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 TRBV23-1A0A0A0MS06 115 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 CCSO14618 274 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 HS3ST1O14792 307 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 TIMM8AO60220 97 aaPredicted RBP7.99□□□□□ -1.13
LINC00838-201ENST00000562956 RP2O75695 350 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 KITLGP21583 273 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 TAS2R31P59538 309 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 GMFBP60983 142 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 DHODHQ02127 395 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 MSMPQ1L6U9 139 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 SLC16A13Q7RTY0 426 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 C5orf24Q7Z6I8 188 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 CBLN2Q8IUK8 224 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 WDR13Q9H1Z4 485 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 PLK3Q9H4B4 646 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 MSL2Q9HCI7 577 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 CHMP1AQ9HD42 196 aaPredicted RBP7.99□□□□□ -1.13
LINC00838-201ENST00000562956 PRR14LQ5THK1 2151 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 TRAV24A0A0B4J272 114 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 GPR31O00270 319 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 DLL1O00548 723 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 NDUFS6O75380 124 aaKnown RBP7.99□□□□□ -1.13
LINC00838-201ENST00000562956 DUS4LO95620 317 aaKnown RBP7.99□□□□□ -1.13
LINC00838-201ENST00000562956 NAPSAO96009 420 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 KCNJ3P48549 501 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 UCNP55089 124 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 ERVK11-1P61568 191 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 SUPT4H1P63272 117 aaKnown RBP7.99□□□□□ -1.13
LINC00838-201ENST00000562956 ZNF718Q3SXZ3 478 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 MBNL2Q5VZF2 373 aaKnown RBP7.99□□□□□ -1.13
LINC00838-201ENST00000562956 DHRS11Q6UWP2 260 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 PDZD9Q8IXQ8 264 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 SUMF2Q8NBJ7 301 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 OR5M8Q8NGP6 311 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 OR1S1Q8NH92 325 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 MUCL1Q96DR8 90 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 SCGB3A2Q96PL1 93 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 PHB2Q99623 299 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 ZNF286AQ9HBT8 521 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 PRR13Q9NZ81 148 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 IGF2RP11717 2491 aa7.99□□□□□ -1.13
LINC00838-201ENST00000562956 ZZEF1O43149 2961 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 PTPRQQ9UMZ3 2332 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 MCRIP1C9JLW8 97 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 F12P00748 615 aaPredicted RBP7.98□□□□□ -1.13
LINC00838-201ENST00000562956 RLN2P04090 185 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 FGF2P09038 288 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 RD3LP0DJH9 198 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 PGAM2P15259 253 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 PPP3CBP16298 524 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 TUBG1P23258 451 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 GCH1P30793 250 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 CCKARP32238 428 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 HOXA4Q00056 320 aaPredicted RBP7.98□□□□□ -1.13
LINC00838-201ENST00000562956 CLEC18BQ6UXF7 455 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 TMUB2Q71RG4 321 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 KCTD9Q7L273 389 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 LINC00596Q86U02 117 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 RDH5Q92781 318 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 NRIP2Q9BQI9 281 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 NKX6-2Q9C056 277 aaPredicted RBP7.98□□□□□ -1.13
LINC00838-201ENST00000562956 TUBG2Q9NRH3 451 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 TAS2R3Q9NYW6 316 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 POLDIP2Q9Y2S7 368 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 PLSCR5A0PG75 271 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 KNG1P01042 644 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 PGA5P0DJD9 388 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 S100A11P31949 105 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 RBMXP38159 391 aaKnown RBP7.98□□□□□ -1.13
LINC00838-201ENST00000562956 IL13RA2Q14627 380 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 SURF2Q15527 256 aaPredicted RBP7.98□□□□□ -1.13
LINC00838-201ENST00000562956 SLC9A3R2Q15599 337 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 Q6P435 159 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 LRP11Q86VZ4 500 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 NEK7Q8TDX7 302 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 Q9N2K0 584 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 DECR2Q9NUI1 292 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 GLS2Q9UI32 602 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 MAP1BP46821 2468 aaKnown RBP7.98□□□□□ -1.13
LINC00838-201ENST00000562956 SPTBN4Q9H254 2564 aa7.98□□□□□ -1.13
LINC00838-201ENST00000562956 TMEM210A6NLX4 147 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms