RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 TNFAIP6P98066 277 aaPredicted RBP11.64□□□□□ -0.55
TPM1-215ENST00000558868 ADIPOQQ15848 244 aa11.64□□□□□ -0.55
TPM1-215ENST00000558868 C11orf88Q6PI97 169 aa11.64□□□□□ -0.55
TPM1-215ENST00000558868 ZNF826PQ6ZT77 177 aa11.64□□□□□ -0.55
TPM1-215ENST00000558868 ZNF808Q8N4W9 903 aaPredicted RBP11.64□□□□□ -0.55
TPM1-215ENST00000558868 TMEM185AQ8NFB2 350 aa11.64□□□□□ -0.55
TPM1-215ENST00000558868 OR11L1Q8NGX0 322 aa11.64□□□□□ -0.55
TPM1-215ENST00000558868 ZFAND1Q8TCF1 268 aa11.64□□□□□ -0.55
TPM1-215ENST00000558868 MARCH1Q8TCQ1 289 aa11.64□□□□□ -0.55
TPM1-215ENST00000558868 PLPPR2Q96GM1 343 aa11.64□□□□□ -0.55
TPM1-215ENST00000558868 ZNF2Q9BSG1 426 aaPredicted RBP11.64□□□□□ -0.55
TPM1-215ENST00000558868 TRAF4Q9BUZ4 470 aaPredicted RBP11.64□□□□□ -0.55
TPM1-215ENST00000558868 GPR132Q9UNW8 380 aa11.64□□□□□ -0.55
TPM1-215ENST00000558868 C14orf166Q9Y224 244 aaKnown RBP11.64□□□□□ -0.55
TPM1-215ENST00000558868 PRR14LQ5THK1 2151 aa11.64□□□□□ -0.55
TPM1-215ENST00000558868 IGKV1D-8A0A087WSZ0 117 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 MEIKINA0A087WXM9 373 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 IGHV3-64DA0A0J9YX35 117 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 TUBAL3A6NHL2 446 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 SRRM5B3KS81 715 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 SIRPB1O00241 398 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 HSPB6O14558 160 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 IGHV1-46P01743 117 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 CD55P08174 381 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 PGAM2P15259 253 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 TNFRSF1AP19438 455 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 AGAP20933 346 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 SERPINF1P36955 418 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 NPY4RP50391 375 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 ADAM5Q6NVV9 412 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 ZNF880Q6PDB4 577 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 LYG2Q86SG7 212 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 PEG10Q86TG7 708 aaKnown RBP11.63□□□□□ -0.55
TPM1-215ENST00000558868 C12orf45Q8N5I9 185 aaPredicted RBP11.63□□□□□ -0.55
TPM1-215ENST00000558868 OR11H7Q8NGC8 314 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 MRPL30Q8TCC3 161 aaKnown RBP11.63□□□□□ -0.55
TPM1-215ENST00000558868 ITLN1Q8WWA0 313 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 ASB13Q8WXK3 278 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 MRGPRFQ96AM1 343 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 CYYR1Q96J86 154 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 WDR13Q9H1Z4 485 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 TMEM165Q9HC07 324 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 MGAT4CQ9UBM8 478 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 OR14J1Q9UGF5 321 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 NPTNQ9Y639 398 aa11.63□□□□□ -0.55
TPM1-215ENST00000558868 SHISA9B4DS77 424 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 FABP7O15540 132 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 DIRAS3O95661 229 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 TK1P04183 234 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 GSTT2P0CG29 244 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 APOBEC3AP31941 199 aaPredicted RBP11.62□□□□□ -0.55
TPM1-215ENST00000558868 GMFBP60983 142 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 HERV-K104P61576 105 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 TESK1Q15569 626 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 TMEM128Q5BJH2 165 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 FAM209AQ5JX71 171 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 AADACL3Q5VUY0 350 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 ZNF497Q6ZNH5 498 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 MOGAT3Q86VF5 341 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 GAPTQ8N292 157 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 MUC20Q8N307 709 aaPredicted RBP11.62□□□□□ -0.55
TPM1-215ENST00000558868 DRAXINQ8NBI3 349 aaPredicted RBP11.62□□□□□ -0.55
TPM1-215ENST00000558868 OR4A4PQ8NGN8 299 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 PPP1R35Q8TAP8 253 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 LINC01560Q8TB33 94 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 Q8TCH9 128 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 FYTTD1Q96QD9 318 aaKnown RBP11.62□□□□□ -0.55
TPM1-215ENST00000558868 ZNF436Q9C0F3 470 aaPredicted RBP11.62□□□□□ -0.55
TPM1-215ENST00000558868 EGLN1Q9GZT9 426 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 CLEC4MQ9H2X3 399 aaPredicted RBP11.62□□□□□ -0.55
TPM1-215ENST00000558868 DECR2Q9NUI1 292 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 RNF7Q9UBF6 113 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 DNAJB11Q9UBS4 358 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 RNF115Q9Y4L5 304 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 WIPI2Q9Y4P8 454 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 BSNQ9UPA5 3926 aa11.62□□□□□ -0.55
TPM1-215ENST00000558868 RELNP78509 3460 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.61□□□□□ -0.55
TPM1-215ENST00000558868 TMEM30CPA0ZSE6 113 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 C9orf170A2RU37 121 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 OR5H14A6NHG9 310 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 C17orf100A8MU93 164 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 M0R233 179 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 WNT9BO14905 357 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 ATXN7O15265 892 aaPredicted RBP11.61□□□□□ -0.55
TPM1-215ENST00000558868 HLA-AP01891 365 aaKnown RBP11.61□□□□□ -0.55
TPM1-215ENST00000558868 C1QBP02746 253 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 CTSDP07339 412 aaPredicted RBP11.61□□□□□ -0.55
TPM1-215ENST00000558868 GIPP09681 153 aaPredicted RBP11.61□□□□□ -0.55
TPM1-215ENST00000558868 IRF2P14316 349 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 AKR1C4P17516 323 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 ZBTB25P24278 435 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 UCP3P55916 312 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 SEC61A1P61619 476 aaKnown RBP11.61□□□□□ -0.55
TPM1-215ENST00000558868 IL13RA1P78552 427 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 DHODHQ02127 395 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 DHRS2Q13268 280 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 EFNB3Q15768 340 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 ZNF660Q6AZW8 331 aaPredicted RBP11.61□□□□□ -0.55
TPM1-215ENST00000558868 SLC35E4Q6ICL7 350 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms