RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 VCXQ9H320 206 aa1.87□□□□□ -2.11
SCFD1-219ENST00000556413 WDR55Q9H6Y2 383 aaPredicted RBP1.87□□□□□ -2.11
SCFD1-219ENST00000556413 WDR76Q9H967 626 aa1.87□□□□□ -2.11
SCFD1-219ENST00000556413 PAK1IP1Q9NWT1 392 aaPredicted RBP1.87□□□□□ -2.11
SCFD1-219ENST00000556413 TAS2R7Q9NYW3 318 aa1.87□□□□□ -2.11
SCFD1-219ENST00000556413 CNOT2Q9NZN8 540 aaKnown RBP1.87□□□□□ -2.11
SCFD1-219ENST00000556413 P2RX2Q9UBL9 471 aa1.87□□□□□ -2.11
SCFD1-219ENST00000556413 DUX4Q9UBX2 424 aa1.87□□□□□ -2.11
SCFD1-219ENST00000556413 RIMS3Q9UJD0 308 aa1.87□□□□□ -2.11
SCFD1-219ENST00000556413 POFUT2Q9Y2G5 429 aa1.87□□□□□ -2.11
SCFD1-219ENST00000556413 HDGFL3Q9Y3E1 203 aa1.87□□□□□ -2.11
SCFD1-219ENST00000556413 ABCA13Q86UQ4 5058 aa1.87□□□□□ -2.11
SCFD1-219ENST00000556413 MGAM2Q2M2H8 2515 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 DYSFO75923 2080 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 IGHV1OR15-1A0A075B7D0 117 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 IGHV3OR15-7A0A075B7D8 119 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 IGHV1-69-2A0A0G2JMI3 117 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 A0A0G2JMP0 313 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 A0A0J9YXY3 114 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 A0A0X1KG70 313 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 LOC100653049A0A140TA62 436 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 C5orf49A4QMS7 147 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 RNF222A6NCQ9 220 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 ZNF99A8MXY4 864 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-219ENST00000556413 TMEM114B3SHH9 223 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 CLDN25C9JDP6 229 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 FTCDNL1E5RQL4 147 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 E9PBE3 544 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 GPR171O14626 319 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 TPST1O60507 370 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 TPST2O60704 377 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 TBX19O60806 448 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 KRT34O76011 436 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 IGHV1-46P01743 117 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 BGLAPP02818 100 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 ERCC1P07992 297 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-219ENST00000556413 NEFHP12036 1026 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 ZNF35P13682 527 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 ZNF43P17038 809 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 RPS4Y1P22090 263 aaKnown RBP1.86□□□□□ -2.11
SCFD1-219ENST00000556413 UQCRC2P22695 453 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 CD80P33681 288 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 S100A3P33764 101 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 SERPINB5P36952 375 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 CTRLP40313 264 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 CSNK1A1P48729 337 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 KLF3P57682 345 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-219ENST00000556413 DNAJB13P59910 316 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 DSTNP60981 165 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 PSPHP78330 225 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 H3F3AP84243 136 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 TGFBR3Q03167 851 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 HSF2Q03933 536 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 LRRC74AQ0VAA2 488 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 ST3GAL3Q11203 375 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 KLRD1Q13241 179 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 SELPLGQ14242 412 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 PDK3Q15120 406 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 ZMYND11Q15326 602 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 LY6EQ16553 131 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 NSUN5P1Q3KNT7 163 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 LIN52Q52LA3 116 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 ATAD3BQ5T9A4 648 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 METTL11BQ5VVY1 283 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 PRAMEF6Q5VXH4 476 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 ETFRF1Q6IPR1 90 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 ACSM5Q6NUN0 579 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 UGT2A3Q6UWM9 527 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 C20orf196Q8IYI0 205 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 C1orf174Q8IYL3 243 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 LRRC34Q8IZ02 419 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 BATF2Q8N1L9 274 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 C20orf203Q8NBC4 194 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 BHLHE23Q8NDY6 225 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 SLC30A7Q8NEW0 376 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 OR4M2Q8NGB6 313 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 OR4F15Q8NGB8 312 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 OR4K5Q8NGD3 323 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 OR4D11Q8NGI4 311 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 NANPQ8TBE9 248 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 TCP10LQ8TDR4 215 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 TMIGD2Q96BF3 282 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 ZMYND19Q96E35 227 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-219ENST00000556413 NEURL3Q96EH8 262 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 PPP3R2Q96LZ3 170 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 PANX1Q96RD7 426 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 ATP6V0BQ99437 205 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 SORT1Q99523 831 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 PAIP2Q9BPZ3 127 aaKnown RBP1.86□□□□□ -2.11
SCFD1-219ENST00000556413 CHRDL1Q9BU40 450 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 RNF126Q9BV68 326 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 SUCNR1Q9BXA5 334 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 DPY30Q9C005 99 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 OR2J1Q9GZK6 312 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 IQCGQ9H095 443 aaKnown RBP1.86□□□□□ -2.11
SCFD1-219ENST00000556413 RACGAP1Q9H0H5 632 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 CENPHQ9H3R5 247 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 ZNF442Q9H7R0 627 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 KAT8Q9H7Z6 458 aaKnown RBP1.86□□□□□ -2.11
SCFD1-219ENST00000556413 NANSQ9NR45 359 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms