RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 FAM90A13PP0C7W8 464 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 FAM90A14PP0C7W9 464 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 FAM90A24PP0C7X0 464 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 PPIAL4FP0DN26 164 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 CALCBP10092 127 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 GTF2F2P13984 249 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 ARSBP15848 533 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 SLC25A16P16260 332 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 MDH2P40926 338 aaKnown RBP4.78□□□□□ -1.64
SCAF11-213ENST00000550629 OR3A4PP47883 348 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 POU3F4P49335 361 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 FGF12P61328 243 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 VBP1P61758 197 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 NCS1P62166 190 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 BTG1P62324 171 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 ZNF146Q15072 292 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 ZMYND11Q15326 602 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 RSU1Q15404 277 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 DGUOKQ16854 277 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 MICBQ29980 383 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 TMEM155Q4W5P6 130 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 SPRNQ5BIV9 151 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 ATPAF1Q5TC12 328 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-213ENST00000550629 SHEQ5VZ18 495 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 SFXN4Q6P4A7 337 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 ZNF826PQ6ZT77 177 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 OR2W3Q7Z3T1 314 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 LINC00596Q86U02 117 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 NR2C2APQ86WQ0 139 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 LRRC28Q86X40 367 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-213ENST00000550629 FAM58AQ8N1B3 248 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 GCSAMQ8N6F7 178 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 OR51T1Q8NGJ9 327 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 KCNG3Q8TAE7 436 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 C10orf105Q8TEF2 133 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 LRRC29Q8WV35 223 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 ACOT12Q8WYK0 555 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 AP3S1Q92572 193 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 YIPF5Q969M3 257 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 SLC25A28Q96A46 364 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 FAM3DQ96BQ1 224 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 PERPQ96FX8 193 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 C1orf147Q96MC9 270 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-213ENST00000550629 SPACA5Q96QH8 159 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 GFI1Q99684 422 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 NAA50Q9GZZ1 169 aaKnown RBP4.78□□□□□ -1.64
SCAF11-213ENST00000550629 METTL9Q9H1A3 318 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 DCSTAMPQ9H295 470 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 PLGRKTQ9HBL7 147 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 HMG20AQ9NP66 347 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 UFSP2Q9NUQ7 469 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 MTCH1Q9NZJ7 389 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 RSL24D1Q9UHA3 163 aaKnown RBP4.78□□□□□ -1.64
SCAF11-213ENST00000550629 GLS2Q9UI32 602 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 AK6Q9Y3D8 172 aaKnown RBP4.78□□□□□ -1.64
SCAF11-213ENST00000550629 PPIAL4AQ9Y536 164 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 ETV7Q9Y603 341 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 SPG11Q96JI7 2443 aa4.78□□□□□ -1.64
SCAF11-213ENST00000550629 TEX15Q9BXT5 2789 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 OTOGQ6ZRI0 2925 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 MAP1AP78559 2803 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-213ENST00000550629 IGKV1-12A0A0C4DH73 117 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 IGHV3-64DA0A0J9YX35 117 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 DPPA5A6NC42 116 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 OOEPA6NGQ2 149 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 OR2AT4A6NND4 320 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 LDLRAD4O15165 306 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 PPIHO43447 177 aaKnown RBP4.77□□□□□ -1.65
SCAF11-213ENST00000550629 SPRY1O43609 319 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-213ENST00000550629 SYNGR1O43759 233 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 ANGPTL7O43827 346 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 NDUFS7O75251 213 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 SCGNO76038 276 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 LY6HO94772 140 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 CYB5R3P00387 301 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-213ENST00000550629 IGKV1D-12P01611 117 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 IGHV2-70P01814 119 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 MBPP02686 304 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-213ENST00000550629 CSTBP04080 98 aaKnown RBP4.77□□□□□ -1.65
SCAF11-213ENST00000550629 GLAP06280 429 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 HEXAP06865 529 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 ZNF182P17025 639 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-213ENST00000550629 GLRA1P23415 457 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 COL8A2P25067 703 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 SOX6P35712 828 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 GPR6P46095 362 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-213ENST00000550629 SERPINB10P48595 397 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 RORCP51449 518 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 OR10A3P58181 314 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 LSM3P62310 102 aaKnown RBP4.77□□□□□ -1.65
SCAF11-213ENST00000550629 QRFPP83859 136 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 IL13RA2Q14627 380 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 ZNF404Q494X3 552 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 SLC22A6Q4U2R8 563 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 DMRTC1Q5HYR2 192 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 Q5PR19 223 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 STUMQ69YW2 141 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 AWAT2Q6E213 333 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 GLIPR1L1Q6UWM5 242 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 ACP7Q6ZNF0 438 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms