RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 SPATA3Q8NHX4 192 aa11.13□□□□□ -0.63
RPAIN-205ENST00000536255 FAM46BQ96A09 425 aa11.13□□□□□ -0.63
RPAIN-205ENST00000536255 YIPF6Q96EC8 236 aa11.13□□□□□ -0.63
RPAIN-205ENST00000536255 Q96M66 194 aa11.13□□□□□ -0.63
RPAIN-205ENST00000536255 DPCDQ9BVM2 203 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-205ENST00000536255 C19orf24Q9BVV8 132 aa11.13□□□□□ -0.63
RPAIN-205ENST00000536255 SIRPDQ9H106 197 aa11.13□□□□□ -0.63
RPAIN-205ENST00000536255 METTL8Q9H825 291 aaKnown RBP11.13□□□□□ -0.63
RPAIN-205ENST00000536255 LINC00312Q9Y6C7 94 aa11.13□□□□□ -0.63
RPAIN-205ENST00000536255 IGHV3OR16-10A0A075B7F0 116 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 SHISA3A0PJX4 238 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 NOTOA8MTQ0 251 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 AIPO00170 330 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 HSPB6O14558 160 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 MMP9P14780 707 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 OR10A3P58181 314 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 PAX5Q02548 391 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 RBM39Q14498 530 aaKnown RBP11.12□□□□□ -0.63
RPAIN-205ENST00000536255 P2RY14Q15391 338 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 FAM189A2Q15884 450 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 TUSC1Q2TAM9 212 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 KRBOX4Q5JUW0 171 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 HES5Q5TA89 166 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 GPR157Q5UAW9 335 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 NCR3LG1Q68D85 454 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 C9orf139Q6ZV77 190 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 TRAPPC6BQ86SZ2 158 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 SUMF2Q8NBJ7 301 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 OR13F1Q8NGS4 319 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 NEK7Q8TDX7 302 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 SLC25A28Q96A46 364 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 FAM3DQ96BQ1 224 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 JMJD8Q96S16 334 aa11.12□□□□□ -0.63
RPAIN-205ENST00000536255 URM1Q9BTM9 101 aaKnown RBP11.12□□□□□ -0.63
RPAIN-205ENST00000536255 MS4A7Q9GZW8 240 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-205ENST00000536255 TRGV10A0A0A0MS01 117 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 TMEM14DPA8MWL7 114 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 MCRIP1C9JLW8 97 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 RBP4P02753 201 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 GLAP06280 429 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 ZNF728P0DKX0 622 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 FUT3P21217 361 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 SDC2P34741 201 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 RPS27AP62979 156 aaKnown RBP11.11□□□□□ -0.63
RPAIN-205ENST00000536255 GUCA2AQ02747 115 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 AESQ08117 197 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 ATXN7L3Q14CW9 347 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-205ENST00000536255 OR10K2Q6IF99 312 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 METAP1DQ6UB28 335 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-205ENST00000536255 RBMS3Q6XE24 437 aaKnown RBP11.11□□□□□ -0.63
RPAIN-205ENST00000536255 VMO1Q7Z5L0 202 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 BCL6BQ8N143 479 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-205ENST00000536255 SIGLECL1Q8N7X8 197 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 OR51D1Q8NGF3 324 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 ZFAND2BQ8WV99 257 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 ZNF714Q96N38 554 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 NEDD4LQ96PU5 975 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 TBX15Q96SF7 602 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 CENPOQ9BU64 300 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 TM2D1Q9BX74 207 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 NCOR1P1Q9H4R4 102 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 UNKLQ9H9P5 680 aaKnown RBP11.11□□□□□ -0.63
RPAIN-205ENST00000536255 OR6C3Q9NZP0 311 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 RCC2Q9P258 522 aaKnown RBP11.11□□□□□ -0.63
RPAIN-205ENST00000536255 FBLN5Q9UBX5 448 aa11.11□□□□□ -0.63
RPAIN-205ENST00000536255 UBE2J1Q9Y385 318 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-205ENST00000536255 ODAMA1E959 279 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 PDCD6O75340 191 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 PRTN3P24158 256 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 GLIPR1P48060 266 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 CLDN12P56749 244 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 QRFPP83859 136 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 UNC119Q13432 240 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 ZNF273Q14593 569 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 C2orf76Q3KRA6 126 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 RAB12Q6IQ22 244 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 GPR141Q7Z602 305 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 CROCCP3Q8IVE0 287 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 TPRX1Q8N7U7 411 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 ZNF565Q8N9K5 539 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 FUNDC2Q9BWH2 189 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 GAL3ST2Q9H3Q3 398 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 HEXA-AS1Q9H8Q6 139 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 LIN7BQ9HAP6 207 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 ESM1Q9NQ30 184 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 SIRT7Q9NRC8 400 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 ING3Q9NXR8 418 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 TAS2R3Q9NYW6 316 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 RAB22AQ9UL26 194 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 PEX16Q9Y5Y5 336 aa11.1□□□□□ -0.63
RPAIN-205ENST00000536255 STAB1Q9NY15 2570 aa11.09□□□□□ -0.63
RPAIN-205ENST00000536255 MEIKINA0A087WXM9 373 aa11.09□□□□□ -0.63
RPAIN-205ENST00000536255 TMEM30CPA0ZSE6 113 aa11.09□□□□□ -0.63
RPAIN-205ENST00000536255 C17orf98A8MV24 154 aa11.09□□□□□ -0.63
RPAIN-205ENST00000536255 TRIM77I1YAP6 450 aa11.09□□□□□ -0.63
RPAIN-205ENST00000536255 TMEM127O75204 238 aa11.09□□□□□ -0.63
RPAIN-205ENST00000536255 CA11O75493 328 aa11.09□□□□□ -0.63
RPAIN-205ENST00000536255 CCL3L1P16619 93 aa11.09□□□□□ -0.63
RPAIN-205ENST00000536255 ERVFRD-1P60508 538 aa11.09□□□□□ -0.63
RPAIN-205ENST00000536255 MXD1Q05195 221 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms