RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 UBBP0CG47 229 aa18.55■□□□□ 0.56
SFSWAP-204ENST00000535399 MGMTP16455 207 aa18.55■□□□□ 0.56
SFSWAP-204ENST00000535399 KCNJ3P48549 501 aa18.55■□□□□ 0.56
SFSWAP-204ENST00000535399 PAX5Q02548 391 aa18.55■□□□□ 0.56
SFSWAP-204ENST00000535399 ZNF782Q6ZMW2 699 aaPredicted RBP18.55■□□□□ 0.56
SFSWAP-204ENST00000535399 SLC25A28Q96A46 364 aa18.55■□□□□ 0.56
SFSWAP-204ENST00000535399 Q96M66 194 aa18.55■□□□□ 0.56
SFSWAP-204ENST00000535399 HEXA-AS1Q9H8Q6 139 aa18.55■□□□□ 0.56
SFSWAP-204ENST00000535399 ING3Q9NXR8 418 aa18.55■□□□□ 0.56
SFSWAP-204ENST00000535399 TRGV10A0A0A0MS01 117 aa18.54■□□□□ 0.56
SFSWAP-204ENST00000535399 SHISA3A0PJX4 238 aa18.54■□□□□ 0.56
SFSWAP-204ENST00000535399 DNAJC9-AS1A6NH13 148 aa18.54■□□□□ 0.56
SFSWAP-204ENST00000535399 CRTAPO75718 401 aaPredicted RBP18.54■□□□□ 0.56
SFSWAP-204ENST00000535399 TNFAIP8O95379 198 aa18.54■□□□□ 0.56
SFSWAP-204ENST00000535399 IGHV1-8P0DP01 117 aa18.54■□□□□ 0.56
SFSWAP-204ENST00000535399 VSIG8P0DPA2 414 aa18.54■□□□□ 0.56
SFSWAP-204ENST00000535399 HTR2CP28335 458 aa18.54■□□□□ 0.56
SFSWAP-204ENST00000535399 BAMBIQ13145 260 aa18.54■□□□□ 0.56
SFSWAP-204ENST00000535399 NEDD8Q15843 81 aa18.54■□□□□ 0.56
SFSWAP-204ENST00000535399 RSBN1Q5VWQ0 802 aaPredicted RBP18.54■□□□□ 0.56
SFSWAP-204ENST00000535399 TRAPPC6BQ86SZ2 158 aa18.54■□□□□ 0.56
SFSWAP-204ENST00000535399 OR6M1Q8NGM8 313 aa18.54■□□□□ 0.56
SFSWAP-204ENST00000535399 PLPPR1Q8TBJ4 325 aa18.54■□□□□ 0.56
SFSWAP-204ENST00000535399 SELENOIQ9C0D9 397 aa18.54■□□□□ 0.56
SFSWAP-204ENST00000535399 NCOR1P1Q9H4R4 102 aa18.54■□□□□ 0.56
SFSWAP-204ENST00000535399 RCC2Q9P258 522 aaKnown RBP18.54■□□□□ 0.56
SFSWAP-204ENST00000535399 TRAV1-2A0A0B4J238 106 aa18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 SLC17A2O00624 439 aa18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 COX7A1P24310 79 aa18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 UBA52P62987 128 aaKnown RBP18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 QRFPP83859 136 aa18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 C22orf42Q6IC83 251 aa18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 OR10K2Q6IF99 312 aa18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 BRICD5Q6PL45 260 aa18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 Q6YL49 198 aa18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 ZFAND2BQ8WV99 257 aa18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 ZDHHC16Q969W1 377 aa18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 FAM46BQ96A09 425 aa18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 BARHL1Q9BZE3 327 aa18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 CST11Q9H112 138 aa18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 KCNK15Q9H427 330 aa18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 ZNF696Q9H7X3 374 aa18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 TAS2R3Q9NYW6 316 aa18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 KIF25Q9UIL4 384 aa18.53■□□□□ 0.56
SFSWAP-204ENST00000535399 FAM90A10PA6NDY2 464 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 FAM90A18PA6NE21 464 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 FAM90A16PA6NEW6 464 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 FAM90A20PA6NIJ5 464 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 FAM90A8PA6NJQ4 464 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 FAM90A7PA6NKC0 464 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 FAM90A22PA8MWA6 464 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 FAM90A12PA8MX19 464 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 FAM90A5PA8MXJ8 464 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 FAM90A23PA8MXZ1 464 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 MMP23AO75900 390 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 MPIG6BO95866 241 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 FAM90A15PP0C7V4 464 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 FAM90A13PP0C7W8 464 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 FAM90A14PP0C7W9 464 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 FAM90A24PP0C7X0 464 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 SAA4P35542 130 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 ATAD3CQ5T2N8 411 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 SIGIRRQ6IA17 410 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 TSPAN14Q8NG11 270 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 DUX5Q96PT3 197 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 SPACA1Q9HBV2 294 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 OR6C3Q9NZP0 311 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 STUB1Q9UNE7 303 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 SESN1Q9Y6P5 492 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 V9GY05 133 aa18.52■□□□□ 0.56
SFSWAP-204ENST00000535399 A0A087WXM4 84 aa18.51■□□□□ 0.55
SFSWAP-204ENST00000535399 TMEM14DPA8MWL7 114 aa18.51■□□□□ 0.55
SFSWAP-204ENST00000535399 TRIM77I1YAP6 450 aa18.51■□□□□ 0.55
SFSWAP-204ENST00000535399 CLPXO76031 633 aa18.51■□□□□ 0.55
SFSWAP-204ENST00000535399 BPNT1O95861 308 aa18.51■□□□□ 0.55
SFSWAP-204ENST00000535399 CGB3P0DN86 165 aa18.51■□□□□ 0.55
SFSWAP-204ENST00000535399 CGB7P0DN87 165 aa18.51■□□□□ 0.55
SFSWAP-204ENST00000535399 FGF9P31371 208 aaPredicted RBP18.51■□□□□ 0.55
SFSWAP-204ENST00000535399 UNC119Q13432 240 aa18.51■□□□□ 0.55
SFSWAP-204ENST00000535399 P2RY14Q15391 338 aa18.51■□□□□ 0.55
SFSWAP-204ENST00000535399 SLC9A3R2Q15599 337 aa18.51■□□□□ 0.55
SFSWAP-204ENST00000535399 RAB11BQ15907 218 aa18.51■□□□□ 0.55
SFSWAP-204ENST00000535399 MIDNQ504T8 468 aa18.51■□□□□ 0.55
SFSWAP-204ENST00000535399 AJUBAQ96IF1 538 aa18.51■□□□□ 0.55
SFSWAP-204ENST00000535399 C19orf24Q9BVV8 132 aa18.51■□□□□ 0.55
SFSWAP-204ENST00000535399 PLGRKTQ9HBL7 147 aa18.51■□□□□ 0.55
SFSWAP-204ENST00000535399 DSCAML1Q8TD84 2053 aa18.51■□□□□ 0.55
SFSWAP-204ENST00000535399 MEIKINA0A087WXM9 373 aa18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 MEIOCA2RUB1 952 aa18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 CLDN34H7C241 214 aa18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 MELTFP08582 738 aa18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 MYL9P24844 172 aa18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 PSMD7P51665 324 aa18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 OR10A3P58181 314 aa18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 C17orf58Q2M2W7 97 aa18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 PRAMEF5Q5TYX0 476 aa18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 SLC35E4Q6ICL7 350 aa18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 LDLRAD3Q86YD5 345 aa18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 OR13A1Q8NGR1 328 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms