RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 C9orf170A2RU37 121 aa5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 TRIM77I1YAP6 450 aa5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 J3KRW8 73 aa5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 MMP7P09237 267 aaPredicted RBP5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 FCARP24071 287 aa5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 CTSSP25774 331 aa5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 GZMKP49863 264 aa5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 PAFAH1B2P68402 229 aa5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 ZNF658BQ4V348 819 aaPredicted RBP5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 PDZD11Q5EBL8 140 aa5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 FA2HQ7L5A8 372 aa5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 OR2C3Q8N628 320 aa5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 TEX29Q8N6K0 151 aa5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 GVQW1Q8N7I0 195 aa5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 ANGPTL4Q9BY76 406 aa5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 SH2D2AQ9NP31 389 aa5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 FRRS1LQ9P0K9 344 aa5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 SF3B6Q9Y3B4 125 aaKnown RBP5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 PCDHGA9Q9Y5G4 932 aaKnown RBP5.6□□□□□ -1.51
UBQLN1-206ENST00000533705 TRAV39A0A0B4J263 110 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 NPIPB8E9PQR5 432 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 HAX1O00165 279 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 UPK3AO75631 287 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 CTSDP07339 412 aaPredicted RBP5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 RAB32Q13637 225 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 HARBI1Q96MB7 349 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 PIPOXQ9P0Z9 390 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 MYO5AQ9Y4I1 1855 aaKnown RBP5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 MAP1LC3B2A6NCE7 125 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 FFAR1O14842 300 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 OGG1O15527 345 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 ARG1P05089 322 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 NGFRP08138 427 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 FOSL1P15407 271 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 REG1BP48304 166 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 CDC34P49427 236 aaPredicted RBP5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 C19orf57Q0VDD7 668 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 IL13RA2Q14627 380 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 GABRA6Q16445 453 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 TBC1D26Q86UD7 250 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 MAP1LC3BQ9GZQ8 125 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 CCL27Q9Y4X3 112 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 LOC102723971A0A1B0GUV8 181 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 SMAD7O15105 426 aaKnown RBP5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 SOCS1O15524 211 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 CD200P41217 278 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 TCTE3Q8IZS6 198 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 SLC24A4Q8NFF2 622 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 SLC26A10Q8NG04 563 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 Q8WTZ3 238 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 RNF2Q99496 336 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 SLC2A8Q9NY64 477 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 ARL2-SNX15V9GYD0 113 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 ZDBF2Q9HCK1 2354 aa5.59□□□□□ -1.51
UBQLN1-206ENST00000533705 CDK2AP1O14519 115 aa5.59□□□□□ -1.52
UBQLN1-206ENST00000533705 HSBP1O75506 76 aa5.59□□□□□ -1.52
UBQLN1-206ENST00000533705 GYPAP02724 150 aa5.59□□□□□ -1.52
UBQLN1-206ENST00000533705 ACAA2P42765 397 aaKnown RBP5.59□□□□□ -1.52
UBQLN1-206ENST00000533705 AESQ08117 197 aa5.59□□□□□ -1.52
UBQLN1-206ENST00000533705 DGAT2L7PQ6IED9 249 aa5.59□□□□□ -1.52
UBQLN1-206ENST00000533705 RBM14Q96PK6 669 aaKnown RBP5.59□□□□□ -1.52
UBQLN1-206ENST00000533705 CCL13Q99616 98 aa5.59□□□□□ -1.52
UBQLN1-206ENST00000533705 SLIRPQ9GZT3 109 aaKnown RBP5.59□□□□□ -1.52
UBQLN1-206ENST00000533705 PRNDQ9UKY0 176 aa5.59□□□□□ -1.52
UBQLN1-206ENST00000533705 HILPDAQ9Y5L2 63 aa5.59□□□□□ -1.52
UBQLN1-206ENST00000533705 OR4C45A6NMZ5 311 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 ERVFRD-1P60508 538 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 UBE2L3P68036 154 aaKnown RBP5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 SURF2Q15527 256 aaPredicted RBP5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 FAM27BQ5VT28 67 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 CDCP2Q5VXM1 449 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 MYPOPQ86VE0 399 aaPredicted RBP5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 DUSP18Q8NEJ0 188 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 ZNF680Q8NEM1 530 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 OR10A7Q8NGE5 316 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 ATP5SQ99766 215 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 CHST5Q9GZS9 411 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 KCNK15Q9H427 330 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 RHOFQ9HBH0 211 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 WIPI2Q9Y4P8 454 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 HS3ST3B1Q9Y662 390 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 TRIP12Q14669 1992 aaPredicted RBP5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 A0A1W2PPE3 182 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 A0A1W2PQM1 296 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 ATP6V1G2-DDX39BF2Z307 99 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 SYNGR2O43760 224 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 AMTP48728 403 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 GNG4P50150 75 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 MMP16P51512 607 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 HLA-DRB3P79483 266 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 MIDNQ504T8 468 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 C4orf17Q53FE4 359 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 OR8I2Q8N0Y5 310 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 COMMD1Q8N668 190 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 OR4D10Q8NGI6 311 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 OR10G4Q8NGN3 311 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 OR10G9Q8NGN4 311 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 OR10G7Q8NGN6 311 aa5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 LILRB1Q8NHL6 650 aaPredicted RBP5.58□□□□□ -1.52
UBQLN1-206ENST00000533705 ZNF596Q8TC21 504 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms