RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ARSBP15848 533 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 CCL3L1P16619 93 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 RAB3BP20337 219 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 SAA4P35542 130 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 GLIPR1P48060 266 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 KLRD1Q13241 179 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 DYNC1I2Q13409 638 aaKnown RBP4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZNF273Q14593 569 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 SSX1Q16384 188 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 TAF9Q16594 264 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 NKAPLQ5M9Q1 402 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 C1orf100Q5SVJ3 147 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 RUSC1-AS1Q66K80 236 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 C22orf42Q6IC83 251 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 RAB12Q6IQ22 244 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 Q6P435 159 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 TRAT1Q6PIZ9 186 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 CRIP3Q6Q6R5 217 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZNF782Q6ZMW2 699 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 TMEM91Q6ZNR0 172 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR2W3Q7Z3T1 314 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 RNF144BQ7Z419 303 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 LRRTM1Q86UE6 522 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 BCL6BQ8N143 479 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 Q8N7P7 452 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 TPRX1Q8N7U7 411 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 SUMF2Q8NBJ7 301 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 Q8NFD4 153 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 SSMEM1Q8WWF3 244 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM46BQ96A09 425 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 KCTD7Q96MP8 289 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 NCOR1P1Q9H4R4 102 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 BANF2Q9H503 90 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 IFT22Q9H7X7 185 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 ETAA1Q9NY74 926 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 TAS2R3Q9NYW6 316 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 KCNIP1Q9NZI2 227 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 KIF25Q9UIL4 384 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 AK6Q9Y3D8 172 aaKnown RBP4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 PEX16Q9Y5Y5 336 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 SESN1Q9Y6P5 492 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 V9GY05 133 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 NSD1Q96L73 2696 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 ABCA2Q9BZC7 2435 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 TRAV24A0A0B4J272 114 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 A0A0U1RQK1 487 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 LOC100506127A0A0U1RQW1 187 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 A0A1W2PP11 408 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 MEX3AA1L020 520 aaKnown RBP4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 RNASEK-C17orf49H0YIS7 233 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 CLDN34H7C241 214 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 AIPO00170 330 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 TOR1AO14656 332 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 SPINT2O43291 252 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 HOXA3O43365 443 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 PDCD6O75340 191 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 CA11O75493 328 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 VENTXO95231 258 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 ARG1P05089 322 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 GLAP06280 429 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 CD36P16671 472 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 GZMHP20718 246 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 FUT3P21217 361 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 GADD45AP24522 165 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 CDK2P24941 298 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 NFYBP25208 207 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 FGF9P31371 208 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 CEACAM3P40198 252 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 PRRX1P54821 245 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 RPS27AP62979 156 aaKnown RBP4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 UBA52P62987 128 aaKnown RBP4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 MRPS15P82914 257 aaKnown RBP4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 PAX5Q02548 391 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 PRB3Q04118 309 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 P2RY14Q15391 338 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 DEFB112Q30KQ8 113 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 TMEM30BQ3MIR4 351 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 C6orf183Q5T699 404 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 SYT6Q5T7P8 510 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 HES5Q5TA89 166 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 PRAMEF5Q5TYX0 476 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 SLC35E4Q6ICL7 350 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 CD200R1LQ6Q8B3 271 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 HEPN1Q6WQI6 88 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 RTN4RL2Q86UN3 420 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 TPRA1Q86W33 373 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 PNKDQ8N490 385 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 TMEM86BQ8N661 226 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR5R1Q8NH85 324 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 NDNFQ8TB73 568 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZNF596Q8TC21 504 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM216AQ8WUB2 273 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 CORO2AQ92828 525 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 CREB3L1Q96BA8 519 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 COQ2Q96H96 371 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 Q96M66 194 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 CHCHD6Q9BRQ6 235 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 C19orf24Q9BVV8 132 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 CLEC7AQ9BXN2 247 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 PPIL3Q9H2H8 161 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms