RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 PIEZO2Q9H5I5 2752 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 A0A087WWC5 75 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 A0A1W2PRE2 83 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 A0A1W2PRF3 423 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 A0A1W2PRM7 423 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 A0A1W2PRS3 328 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 LRP5LA4QPB2 252 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 FAM90A7PA6NKC0 464 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 FAM90A22PA8MWA6 464 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 FAM90A12PA8MX19 464 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 FAM90A23PA8MXZ1 464 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 J3QKU1 62 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 SDHDO14521 159 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 TMPRSS11DO60235 418 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 MPZL2O60487 215 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 STK17BO94768 372 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 SCG5P05408 212 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 FURINP09958 794 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 PIRTP0C851 137 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 PLA2G2AP14555 144 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 TNFRSF1BP20333 461 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 MAOAP21397 527 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 PRKACGP22612 351 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 NFYBP25208 207 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 PSMB9P28065 219 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 MPGP29372 298 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 PRDX2P32119 198 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 SNCAP37840 140 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 OR3A2P47893 321 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 AMTP48728 403 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 LSM3P62310 102 aaKnown RBP6.53□□□□□ -1.36
HDAC3-216ENST00000523088 RPL8P62917 257 aaKnown RBP6.53□□□□□ -1.36
HDAC3-216ENST00000523088 SMAGPQ0VAQ4 97 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 ACKR1Q16570 336 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 TMEM183BQ1AE95 376 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 TRMT12Q53H54 448 aaKnown RBP6.53□□□□□ -1.36
HDAC3-216ENST00000523088 LRRC10Q5BKY1 277 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 EMC4Q5J8M3 183 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 RTL6Q6ICC9 239 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 PCSK4Q6UW60 755 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 MRGPRGQ86SM5 289 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 TMPRSS11BQ86T26 416 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 OOSP2Q86WS3 158 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 ZNF547Q8IVP9 402 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 LILRA3Q8N6C8 439 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-216ENST00000523088 OR10G9Q8NGN4 311 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 WIPF2Q8TF74 440 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-216ENST00000523088 DCUN1D4Q92564 292 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 SLC25A28Q96A46 364 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 FGGYQ96C11 551 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 RAB39BQ96DA2 213 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 ACY3Q96HD9 319 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 OXGR1Q96P68 337 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 CIB3Q96Q77 187 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-216ENST00000523088 SMIM14Q96QK8 99 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 TSPAN32Q96QS1 320 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 TIMP4Q99727 224 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 SLC25A33Q9BSK2 321 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 CHST8Q9H2A9 424 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 KCNK15Q9H427 330 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 GPR35Q9HC97 309 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 ACSS2Q9NR19 701 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 TMEM100Q9NV29 134 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 ZNF586Q9NXT0 402 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 ALKBH4Q9NXW9 302 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 B4GALT7Q9UBV7 327 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 BOKQ9UMX3 212 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-216ENST00000523088 WSB1Q9Y6I7 421 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 GCN1Q92616 2671 aaKnown RBP6.53□□□□□ -1.36
HDAC3-216ENST00000523088 A0A087WUU8 490 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 IGHV1-69-2A0A0G2JMI3 117 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 TLCD2A6NGC4 264 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 SULT2B1O00204 365 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 TNFSF11O14788 317 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 FCN3O75636 299 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 PRSS23O95084 383 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 EML2O95834 649 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 NUDT3O95989 172 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 CRYAAP02489 173 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 CSN2P05814 226 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 LIFP15018 202 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 SOX3P41225 446 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 ELK3P41970 407 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 ZNF140P52738 457 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-216ENST00000523088 ISL1P61371 349 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 DHRS2Q13268 280 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 TGIF1Q15583 401 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 SSX1Q16384 188 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 CT83Q5H943 113 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 LYPLAL1Q5VWZ2 237 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 C19orf35Q6ZS72 473 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 ZNF761Q86XN6 746 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-216ENST00000523088 TMEM123Q8N131 208 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 C5orf17Q8NAS9 161 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 OR4F5Q8NH21 305 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 ZNRF2Q8NHG8 242 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 FAM110DQ8TAY7 271 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-216ENST00000523088 ABHD5Q8WTS1 349 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 MZB1Q8WU39 189 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 GRAMD2BQ96HH9 432 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms