RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 TOX4O94842 621 aa14.24□□□□□ -0.13
PCDHA3-201ENST00000522353 CPN1P15169 458 aa14.24□□□□□ -0.13
PCDHA3-201ENST00000522353 INSL4Q14641 139 aa14.24□□□□□ -0.13
PCDHA3-201ENST00000522353 ZBTB34Q8NCN2 500 aa14.24□□□□□ -0.13
PCDHA3-201ENST00000522353 PCGF1Q9BSM1 259 aa14.24□□□□□ -0.13
PCDHA3-201ENST00000522353 TMPRSS5Q9H3S3 457 aa14.24□□□□□ -0.13
PCDHA3-201ENST00000522353 TNS1Q9HBL0 1735 aaKnown RBP14.24□□□□□ -0.13
PCDHA3-201ENST00000522353 IFNL4K9M1U5 179 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 GREM1O60565 184 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 OR5AC1P0C628 307 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 ERGP11308 486 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 FHL5Q5TD97 284 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 FAHD2BQ6P2I3 314 aaPredicted RBP14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 FAHD2AQ96GK7 314 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 SH2D2AQ9NP31 389 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 PRNDQ9UKY0 176 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 RNASEK-C17orf49H0YIS7 233 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 FCER1GP30273 86 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 KLRB1Q12918 225 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 GUK1Q16774 197 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 GGNBP1Q5YKI7 109 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 SLC24A4Q8NFF2 622 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 OR5C1Q8NGR4 320 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 C2CD4CQ8TF44 421 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 LIPGQ9Y5X9 500 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 ZNF716A6NP11 495 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 RAB5AP20339 215 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 CCL8P80075 99 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 GGTLC2Q14390 218 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 CLLU1Q5K131 121 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 OR2C3Q8N628 320 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 OR4D11Q8NGI4 311 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 OPN3Q9H1Y3 402 aaPredicted RBP14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 FRRS1LQ9P0K9 344 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 TRIP11Q15643 1979 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 PRR19A6NJB7 356 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 OR4C45A6NMZ5 311 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 PAFAH1B2P68402 229 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 ATP5SQ99766 215 aa14.23□□□□□ -0.13
PCDHA3-201ENST00000522353 ARID1AO14497 2285 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 ANKRD20A5PA0PJZ0 165 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 FFAR1O14842 300 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 UPK3AO75631 287 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 CELA2AP08217 269 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 C4orf17Q53FE4 359 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 OR10AC1Q8NH08 325 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 ZNF519Q8TB69 540 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 SLC25A22Q9H936 323 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 ZNF638Q14966 1978 aaKnown RBP14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 ST3GAL2Q16842 350 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 ZNF658BQ4V348 819 aaPredicted RBP14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 HARBI1Q96MB7 349 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 CISD1Q9NZ45 108 aaKnown RBP14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 F5H697 171 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 TSPAN2O60636 221 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 ORM2P19652 201 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 ACAA2P42765 397 aaKnown RBP14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 RAB32Q13637 225 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 MIDNQ504T8 468 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 PRSS54Q6PEW0 395 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 SSX7Q7RTT5 188 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 NFAM1Q8NET5 270 aaPredicted RBP14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 A0A1W2PQM1 296 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 NQO2P16083 231 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 CSF2RBP32927 897 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 AANATQ16613 207 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 ZNF429Q86V71 674 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 DYNLRB2Q8TF09 96 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 LURAP1Q96LR2 239 aa14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 FAM103A1Q9BTL3 118 aaKnown RBP14.22□□□□□ -0.13
PCDHA3-201ENST00000522353 UCP2P55851 309 aa14.21□□□□□ -0.13
PCDHA3-201ENST00000522353 MMDQ15546 238 aa14.21□□□□□ -0.13
PCDHA3-201ENST00000522353 Q8WTZ3 238 aa14.21□□□□□ -0.13
PCDHA3-201ENST00000522353 CEACAM1P13688 526 aa14.21□□□□□ -0.13
PCDHA3-201ENST00000522353 HLA-DRB3P79483 266 aa14.21□□□□□ -0.13
PCDHA3-201ENST00000522353 HLXQ14774 488 aaPredicted RBP14.21□□□□□ -0.13
PCDHA3-201ENST00000522353 WIPI2Q9Y4P8 454 aa14.21□□□□□ -0.13
PCDHA3-201ENST00000522353 WSB1Q9Y6I7 421 aa14.21□□□□□ -0.13
PCDHA3-201ENST00000522353 A0A1W2PR77 199 aa14.21□□□□□ -0.13
PCDHA3-201ENST00000522353 LNP1A1A4G5 178 aa14.21□□□□□ -0.13
PCDHA3-201ENST00000522353 HSBP1O75506 76 aa14.21□□□□□ -0.13
PCDHA3-201ENST00000522353 MPC2O95563 127 aa14.21□□□□□ -0.13
PCDHA3-201ENST00000522353 MAP1LC3B2A6NCE7 125 aa14.21□□□□□ -0.14
PCDHA3-201ENST00000522353 CTDSPLO15194 276 aa14.21□□□□□ -0.14
PCDHA3-201ENST00000522353 IFI6P09912 130 aa14.21□□□□□ -0.14
PCDHA3-201ENST00000522353 VDAC1P21796 283 aa14.21□□□□□ -0.14
PCDHA3-201ENST00000522353 FOXL2P58012 376 aa14.21□□□□□ -0.14
PCDHA3-201ENST00000522353 HOXA4Q00056 320 aaPredicted RBP14.21□□□□□ -0.14
PCDHA3-201ENST00000522353 DUSP18Q8NEJ0 188 aa14.21□□□□□ -0.14
PCDHA3-201ENST00000522353 MAP1LC3BQ9GZQ8 125 aa14.21□□□□□ -0.14
PCDHA3-201ENST00000522353 RNF122Q9H9V4 155 aa14.21□□□□□ -0.14
PCDHA3-201ENST00000522353 MMP26Q9NRE1 261 aa14.21□□□□□ -0.14
PCDHA3-201ENST00000522353 SLC7A10Q9NS82 523 aa14.21□□□□□ -0.14
PCDHA3-201ENST00000522353 TMEM74BQ9NUR3 256 aa14.21□□□□□ -0.14
PCDHA3-201ENST00000522353 OR2J3O76001 311 aa14.21□□□□□ -0.14
PCDHA3-201ENST00000522353 DXOO77932 396 aaKnown RBP14.21□□□□□ -0.14
PCDHA3-201ENST00000522353 ZNF318Q5VUA4 2279 aa14.2□□□□□ -0.14
PCDHA3-201ENST00000522353 CDC34P49427 236 aaPredicted RBP14.2□□□□□ -0.14
PCDHA3-201ENST00000522353 DLEC1Q9Y238 1755 aa14.2□□□□□ -0.14
PCDHA3-201ENST00000522353 IGKV1-8A0A0C4DH67 115 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms