RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 PAX5Q02548 391 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 ATXN7L3Q14CW9 347 aaPredicted RBP13.73□□□□□ -0.21
SQLE-205ENST00000521232 C17orf58Q2M2W7 97 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 YIF1BQ5BJH7 314 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 OR13C5Q8NGS8 318 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 OR10K1Q8NGX5 313 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 NDNFQ8TB73 568 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 ZNF596Q8TC21 504 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 PGLYRP3Q96LB9 341 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 BARHL1Q9BZE3 327 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 FAM192AQ9GZU8 254 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 PPIL3Q9H2H8 161 aaKnown RBP13.73□□□□□ -0.21
SQLE-205ENST00000521232 MMP27Q9H306 513 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 IL36GQ9NZH8 169 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 DPM3Q9P2X0 92 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 XPNPEP2O43895 674 aa13.72□□□□□ -0.21
SQLE-205ENST00000521232 CDRT1O95170 752 aa13.72□□□□□ -0.21
SQLE-205ENST00000521232 HTR3BO95264 441 aa13.72□□□□□ -0.21
SQLE-205ENST00000521232 JUNBP17275 347 aaPredicted RBP13.72□□□□□ -0.21
SQLE-205ENST00000521232 SLC34A1Q06495 639 aa13.72□□□□□ -0.21
SQLE-205ENST00000521232 HERPUD1Q15011 391 aa13.72□□□□□ -0.21
SQLE-205ENST00000521232 PIGYQ3MUY2 71 aa13.72□□□□□ -0.21
SQLE-205ENST00000521232 Q499Y3 187 aa13.72□□□□□ -0.21
SQLE-205ENST00000521232 PAN3Q58A45 887 aaKnown RBP13.72□□□□□ -0.21
SQLE-205ENST00000521232 NHLRC3Q5JS37 347 aa13.72□□□□□ -0.21
SQLE-205ENST00000521232 DDI2Q5TDH0 399 aa13.72□□□□□ -0.21
SQLE-205ENST00000521232 Q8N2B8 174 aa13.72□□□□□ -0.21
SQLE-205ENST00000521232 ZNF565Q8N9K5 539 aa13.72□□□□□ -0.21
SQLE-205ENST00000521232 OR4D6Q8NGJ1 314 aa13.72□□□□□ -0.21
SQLE-205ENST00000521232 ORAI1Q96D31 301 aa13.72□□□□□ -0.21
SQLE-205ENST00000521232 NKX3-1Q99801 234 aaPredicted RBP13.72□□□□□ -0.21
SQLE-205ENST00000521232 METTL9Q9H1A3 318 aa13.72□□□□□ -0.21
SQLE-205ENST00000521232 IFT22Q9H7X7 185 aa13.72□□□□□ -0.21
SQLE-205ENST00000521232 ING3Q9NXR8 418 aa13.72□□□□□ -0.21
SQLE-205ENST00000521232 ING4Q9UNL4 249 aa13.72□□□□□ -0.21
SQLE-205ENST00000521232 TET2Q6N021 2002 aaPredicted RBP13.72□□□□□ -0.21
SQLE-205ENST00000521232 KBTBD11-OT1A0A1B0GTJ5 212 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 ANKRD65E5RJM6 399 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 CD1AP06126 327 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 C21orf33P30042 268 aaPredicted RBP13.71□□□□□ -0.21
SQLE-205ENST00000521232 KCNJ3P48549 501 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 TAS2R43P59537 309 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 RIPK1Q13546 671 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 Q6ZTK2 550 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 TMEM219Q86XT9 240 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 OSR2Q8N2R0 312 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 ZFP41Q8N8Y5 198 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 CFHR4Q92496 578 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 TFAP2CQ92754 450 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 DCLRE1BQ9H816 532 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 LINC00574Q9H8X3 128 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 ZNF702PQ9H963 129 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 ZNF286AQ9HBT8 521 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 FKBP14Q9NWM8 211 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 ST3GAL6Q9Y274 331 aa13.71□□□□□ -0.21
SQLE-205ENST00000521232 MEIKINA0A087WXM9 373 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 TRBV5-7A0A0A0MS05 114 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 LEUTXA8MZ59 168 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 F2RL2O00254 374 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 HSPB6O14558 160 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 WIPF1O43516 503 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 ZNF780AO75290 641 aaPredicted RBP13.7□□□□□ -0.22
SQLE-205ENST00000521232 PRRX1P54821 245 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 RSBN1Q5VWQ0 802 aaPredicted RBP13.7□□□□□ -0.22
SQLE-205ENST00000521232 STX19Q8N4C7 294 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 KLHDC1Q8N7A1 406 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 NANOGP1Q8N7R0 232 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 BPIFB6Q8NFQ5 453 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 OR13A1Q8NGR1 328 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 CREB3L1Q96BA8 519 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 S100A13Q99584 98 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 ZNF184Q99676 751 aaPredicted RBP13.7□□□□□ -0.22
SQLE-205ENST00000521232 PCDHB16Q9NRJ7 776 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 SERTAD4Q9NUC0 356 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 PAK1IP1Q9NWT1 392 aaPredicted RBP13.7□□□□□ -0.22
SQLE-205ENST00000521232 CKLFQ9UBR5 152 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 KIF25Q9UIL4 384 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 FOXJ3Q9UPW0 622 aa13.7□□□□□ -0.22
SQLE-205ENST00000521232 TRAV8-7A0A075B6U6 113 aa13.69□□□□□ -0.22
SQLE-205ENST00000521232 LY6LH3BQJ8 138 aa13.69□□□□□ -0.22
SQLE-205ENST00000521232 BUB1B-PAK6H3BSN5 160 aa13.69□□□□□ -0.22
SQLE-205ENST00000521232 H3BUI4 141 aa13.69□□□□□ -0.22
SQLE-205ENST00000521232 TOR1AO14656 332 aa13.69□□□□□ -0.22
SQLE-205ENST00000521232 CSTBP04080 98 aaKnown RBP13.69□□□□□ -0.22
SQLE-205ENST00000521232 FSTP19883 344 aa13.69□□□□□ -0.22
SQLE-205ENST00000521232 WNT4P56705 351 aa13.69□□□□□ -0.22
SQLE-205ENST00000521232 RBM11P57052 281 aaKnown RBP13.69□□□□□ -0.22
SQLE-205ENST00000521232 C2orf68Q2NKX9 166 aa13.69□□□□□ -0.22
SQLE-205ENST00000521232 HLA-DRB5Q30154 266 aa13.69□□□□□ -0.22
SQLE-205ENST00000521232 AHSA2Q719I0 299 aa13.69□□□□□ -0.22
SQLE-205ENST00000521232 LINC00596Q86U02 117 aa13.69□□□□□ -0.22
SQLE-205ENST00000521232 SUMF2Q8NBJ7 301 aa13.69□□□□□ -0.22
SQLE-205ENST00000521232 PLPPR1Q8TBJ4 325 aa13.69□□□□□ -0.22
SQLE-205ENST00000521232 KIRREL1Q96J84 757 aa13.69□□□□□ -0.22
SQLE-205ENST00000521232 DPCDQ9BVM2 203 aaPredicted RBP13.69□□□□□ -0.22
SQLE-205ENST00000521232 PRSS22Q9GZN4 317 aa13.69□□□□□ -0.22
SQLE-205ENST00000521232 VCXQ9H320 206 aa13.69□□□□□ -0.22
SQLE-205ENST00000521232 ZNF581Q9P0T4 197 aa13.69□□□□□ -0.22
SQLE-205ENST00000521232 FAM172BPA6NC97 362 aa13.68□□□□□ -0.22
SQLE-205ENST00000521232 MAGEA13PA6NCF6 341 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms