RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 IL36RNQ9UBH0 155 aa5.27□□□□□ -1.57
IGHV4-55-201ENST00000520889 RPUSD1Q9UJJ7 312 aaKnown RBP5.27□□□□□ -1.57
IGHV4-55-201ENST00000520889 ADAM30Q9UKF2 790 aa5.27□□□□□ -1.57
IGHV4-55-201ENST00000520889 MGAT4AQ9UM21 535 aa5.27□□□□□ -1.57
IGHV4-55-201ENST00000520889 UBE2J1Q9Y385 318 aaPredicted RBP5.27□□□□□ -1.57
IGHV4-55-201ENST00000520889 INSIG2Q9Y5U4 225 aa5.27□□□□□ -1.57
IGHV4-55-201ENST00000520889 KPTNQ9Y664 436 aa5.27□□□□□ -1.57
IGHV4-55-201ENST00000520889 LINC00312Q9Y6C7 94 aa5.27□□□□□ -1.57
IGHV4-55-201ENST00000520889 KIAA2026Q5HYC2 2103 aa5.27□□□□□ -1.57
IGHV4-55-201ENST00000520889 ARHGAP32A7KAX9 2087 aa5.27□□□□□ -1.57
IGHV4-55-201ENST00000520889 OTOGQ6ZRI0 2925 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 hCG_1809904A0A1W2PP81 198 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 A0A1W2PPE2 198 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 A0A1W2PR64 198 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 A0A1W2PRV1 198 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 TMEM30CPA0ZSE6 113 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 CCDC160A6NGH7 325 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 ZNF729A6NN14 1252 aaPredicted RBP5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 M0R1W7 72 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 SIRPB1O00241 398 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 XRCC3O43542 346 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 ORC5O43913 435 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 FCN3O75636 299 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 DIRAS3O95661 229 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 NAPSAO96009 420 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 MELTFP08582 738 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 CGB3P0DN86 165 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 CGB7P0DN87 165 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 SNRPBP14678 240 aaKnown RBP5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 NDUFB7P17568 137 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 GABRR1P24046 479 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 ZFP36P26651 326 aaKnown RBP5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 DUSP1P28562 367 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 BLVRBP30043 206 aaPredicted RBP5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 VEGFCP49767 419 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 BPIFB3P59826 476 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 GMFBP60983 142 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 SEC61A1P61619 476 aaKnown RBP5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 RPL31P62899 125 aaKnown RBP5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 HOXA4Q00056 320 aaPredicted RBP5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 PAX8Q06710 450 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 KRTAP1-1Q07627 177 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 Q3ZCU0 254 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 ATAD3CQ5T2N8 411 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 OR10K2Q6IF99 312 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 METAP1DQ6UB28 335 aaPredicted RBP5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 BAIAP2L2Q6UXY1 529 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 ZNF497Q6ZNH5 498 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 Q6ZS49 121 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 CIARTQ8N365 385 aaPredicted RBP5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 ZNF565Q8N9K5 539 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 OR4S1Q8NGB4 309 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 ST8SIA4Q92187 359 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 PHF21AQ96BD5 680 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 SLC25A38Q96DW6 304 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 RAB3CQ96E17 227 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 COQ2Q96H96 371 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 WDFY2Q96P53 400 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 NKX3-1Q99801 234 aaPredicted RBP5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 NICN1Q9BSH3 213 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 SLIRPQ9GZT3 109 aaKnown RBP5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 ATG5Q9H1Y0 275 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 NARFLQ9H6Q4 476 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 MBNL3Q9NUK0 354 aaKnown RBP5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 PLEKHJ1Q9NW61 149 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 PEX16Q9Y5Y5 336 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 CSMD2Q7Z408 3487 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 MAST4O15021 2626 aa5.26□□□□□ -1.57
IGHV4-55-201ENST00000520889 ACANP16112 2415 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 A0A087X0M5 115 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 TRGV10A0A0A0MS01 117 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 A0A0A6YYD4 124 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 A0A1B0GW55 424 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 A0A1B0GX30 115 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 ODAMA1E959 279 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 C17orf98A8MV24 154 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 C22orf46C9J442 243 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 NPIPB11E5RHQ5 1161 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 MFNGO00587 321 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 SOCS1O15524 211 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 CLPXO76031 633 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 PAHP00439 452 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 TGFAP01135 160 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 MT-ND4P03905 459 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 DUX4L2P0CJ85 424 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 DUX4L3P0CJ86 424 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 DUX4L4P0CJ87 422 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 DUX4L5P0CJ88 424 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 DUX4L6P0CJ89 424 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 DUX4L7P0CJ90 424 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 ZNF728P0DKX0 622 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 HIST1H1DP16402 221 aaKnown RBP5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 PTBP1P26599 531 aaKnown RBP eCLIP5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 CEBPDP49716 269 aaPredicted RBP5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 EFNB2P52799 333 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 SNU13P55769 128 aaKnown RBP5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 DLX6P56179 175 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 MRPS10P82664 201 aaKnown RBP5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 SCN1BQ07699 218 aa5.25□□□□□ -1.57
IGHV4-55-201ENST00000520889 PDCD1Q15116 288 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 270.5 ms