RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 TMEM255BQ8WV15 326 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 IL1F10Q8WWZ1 152 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 MCHR2Q969V1 340 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 LSM5Q9Y4Y9 91 aaKnown RBP4.35□□□□□ -1.71
PTPN13-209ENST00000511467 ITGB1BP1O14713 200 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 B3GALT4O96024 378 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 MPZP25189 248 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 CA7P43166 264 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 FGF12P61328 243 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 TNFAIP6P98066 277 aaPredicted RBP4.35□□□□□ -1.71
PTPN13-209ENST00000511467 MADCAM1Q13477 382 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 CEACAM21Q3KPI0 293 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 ZNF658BQ4V348 819 aaPredicted RBP4.35□□□□□ -1.71
PTPN13-209ENST00000511467 PHYHD1Q5SRE7 291 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 CST9LP1Q5W188 147 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 COX15Q7KZN9 410 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 SLC35E3Q7Z769 313 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 OR5M1Q8NGP8 315 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 C7orf34Q96L11 122 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 AUNIPQ9H7T9 357 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 A0A0B4J293 547 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 FXYD1O00168 92 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 TRAF3IP2O43734 574 aaPredicted RBP4.35□□□□□ -1.71
PTPN13-209ENST00000511467 RPL7P18124 248 aaKnown RBP4.35□□□□□ -1.71
PTPN13-209ENST00000511467 HIST1H3AP68431 136 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 MAT1AQ00266 395 aaKnown RBP4.35□□□□□ -1.71
PTPN13-209ENST00000511467 C2orf76Q3KRA6 126 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 TOR2AQ5JU69 321 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 SSX7Q7RTT5 188 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 OR52M1Q8NGK5 317 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 RNASEH2CQ8TDP1 164 aaKnown RBP4.35□□□□□ -1.71
PTPN13-209ENST00000511467 Q8WTZ3 238 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 SNX22Q96L94 193 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 RBCK1Q9BYM8 510 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 GPR35Q9HC97 309 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 HINT3Q9NQE9 182 aaKnown RBP4.35□□□□□ -1.71
PTPN13-209ENST00000511467 RNF7Q9UBF6 113 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 IGHV5-10-1A0A0J9YXX1 117 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 KLK10O43240 276 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 FAHP16930 419 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 HLA-DRB3P79483 266 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 KLRB1Q12918 225 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 ZNF154Q13106 437 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 ZNF260Q3ZCT1 412 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 Q6ZT83 130 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 LINC01599Q8WXQ3 324 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 TEX37Q96LM6 180 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 NUDT22Q9BRQ3 303 aa4.35□□□□□ -1.71
PTPN13-209ENST00000511467 POM121BA6NF01 834 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 LEUTXA8MZ59 168 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 APOC3P02656 99 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 CDKN2AP42771 156 aaKnown RBP4.34□□□□□ -1.71
PTPN13-209ENST00000511467 CCL11P51671 97 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 FAM3AP98173 230 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 SLC35E4Q6ICL7 350 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 PRSS54Q6PEW0 395 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 TOMM20LQ6UXN7 152 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 FAM214BQ7L5A3 538 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 C16orf82Q7Z2V1 217 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 SIGLECL1Q8N7X8 197 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 OR10K1Q8NGX5 313 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 MRPL30Q8TCC3 161 aaKnown RBP4.34□□□□□ -1.71
PTPN13-209ENST00000511467 CNRIP1Q96F85 164 aaPredicted RBP4.34□□□□□ -1.71
PTPN13-209ENST00000511467 ACY3Q96HD9 319 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 RASL11BQ9BPW5 248 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 PCGF1Q9BSM1 259 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 PPIL3Q9H2H8 161 aaKnown RBP4.34□□□□□ -1.71
PTPN13-209ENST00000511467 SEMA5BQ9P283 1151 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 SHISA7A6NL88 538 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 CYR61O00622 381 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 BET1O15155 118 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 RBFOX2O43251 390 aaKnown RBP eCLIP4.34□□□□□ -1.71
PTPN13-209ENST00000511467 TMPRSS11DO60235 418 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 NME2P1O60361 137 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 TOXO94900 526 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 RBP4P02753 201 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 NME2P22392 152 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 PRKACGP22612 351 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 TPPP2P59282 170 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 RND3P61587 244 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 TMEM183BQ1AE95 376 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 RAB6CQ53S08 254 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 VASH2Q86V25 355 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 THAP3Q8WTV1 239 aaPredicted RBP4.34□□□□□ -1.71
PTPN13-209ENST00000511467 ZDHHC16Q969W1 377 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 CTHRC1Q96CG8 243 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 GALNT14Q96FL9 552 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 RAB6CQ9H0N0 254 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 MAGT1Q9H0U3 335 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 NARFLQ9H6Q4 476 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 RPS10P5Q9NQ39 176 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 COA3Q9Y2R0 106 aaPredicted RBP4.34□□□□□ -1.71
PTPN13-209ENST00000511467 BMPR1BO00238 502 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 SLC2A10O95528 541 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 RD3LP0DJH9 198 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 SMIM10L1P0DMW3 83 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 GNB3P16520 340 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 CASP3P42574 277 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 ZNF117Q03924 483 aa4.34□□□□□ -1.71
PTPN13-209ENST00000511467 SHEQ5VZ18 495 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms