RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 TEX26Q8N6G2 289 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 TMEM251Q8N6I4 163 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 CSNK1A1LQ8N752 337 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 TCEANCQ8N8B7 351 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 COX18Q8N8Q8 333 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 ST6GALNAC3Q8NDV1 305 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR51A2Q8NGJ7 313 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR6K2Q8NGY2 324 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR5AK2Q8NH90 309 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR5K2Q8NHB8 316 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 KCNG3Q8TAE7 436 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 ZNF519Q8TB69 540 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 SPRYD4Q8WW59 207 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 GALMQ96C23 342 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 CPB2Q96IY4 423 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 DUX3Q96PT4 197 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 TSPAN32Q96QS1 320 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 MICU1Q9BPX6 476 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 TBL1YQ9BQ87 522 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 TUBB1Q9H4B7 451 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 BANF2Q9H503 90 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 RNF167Q9H6Y7 350 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 REEP1Q9H902 201 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 TBC1D17Q9HA65 648 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 PLEKHA1Q9HB21 404 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 HHATLQ9HCP6 504 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLC7A10Q9NS82 523 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 TMEM242Q9NWH2 141 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 MCTS1Q9ULC4 181 aaKnown RBP3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 TNFSF18Q9UNG2 199 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 ASF1AQ9Y294 204 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 UFC1Q9Y3C8 167 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 ZSWIM8A7E2V4 1837 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 hCG_1818297A0A087WSY0 165 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 TRAV38-1A0A0B4J264 116 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 A0A1B0GW64 132 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 TRDV1A0A1B0GX56 115 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 IGLON5A6NGN9 336 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLC22A20A6NK97 555 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 ZNF705FA8MVS1 300 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 HEPACAM2A8MVW5 462 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 A8MZ25 164 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 UMAD1C9J7I0 102 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 E5RGE8 158 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 E7EQ34 232 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 E9PQ18 207 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 F8VVB4 439 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 F8VWA3 439 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 TAAR5O14804 337 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 EEF1E1O43324 174 aaKnown RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 XRCC3O43542 346 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 LATO43561 262 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 ZNF207O43670 478 aaKnown RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR1F1O43749 312 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 IFNA1P01562 189 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR4Q2P0C623 313 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 ZNF705DP0CH99 300 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 ZNF705BP0CI00 300 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR12D1P0DN82 309 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 MYOD1P15172 320 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 CD1DP15813 335 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 CELP19835 753 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 AZU1P20160 251 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 GPX3P22352 226 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 USF1P22415 310 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 FCARP24071 287 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 GABRA3P34903 492 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 CHI3L1P36222 383 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 TNFSF9P41273 254 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 FRKP42685 505 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 NPBWR2P48146 333 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 FUT6P51993 359 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 UCNP55089 124 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 RAB38P57729 211 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 TAS2R30P59541 319 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 UBE2NP61088 152 aaKnown RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 RPS23P62266 143 aaKnown RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 RPS25P62851 125 aaKnown RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 RUNX1Q01196 453 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 AKR1C1Q04828 323 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 IL10RBQ08334 325 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 ST3GAL3Q11203 375 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 PNRC1Q12796 327 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 GNMTQ14749 295 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 TEAD2Q15562 447 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 HIST3H3Q16695 136 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 TMEM128Q5BJH2 165 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 STPG1Q5TH74 334 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 GFI1BQ5VTD9 330 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 HBMQ6B0K9 141 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR2T5Q6IEZ7 315 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 FAHD1Q6P587 224 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 DHRS11Q6UWP2 260 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 ENPP7Q6UWV6 458 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 GFRALQ6UXV0 394 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 TMEM91Q6ZNR0 172 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 TMEM182Q6ZP80 229 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 CLEC20AQ6ZU45 233 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 TMEM219Q86XT9 240 aa3.95□□□□□ -1.78
HMGB3P13-201ENST00000511263 ODF3L1Q8IXM7 274 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms