RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 JUNBP17275 347 aaPredicted RBP12.3□□□□□ -0.44
RNF4-210ENST00000508235 RAB3BP20337 219 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 UBE2E1P51965 193 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 AESQ08117 197 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 ATXN7L3Q14CW9 347 aaPredicted RBP12.3□□□□□ -0.44
RNF4-210ENST00000508235 TAF9Q16594 264 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 OR2W3Q7Z3T1 314 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 TPRA1Q86W33 373 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 TPRX1Q8N7U7 411 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 ZNF565Q8N9K5 539 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 TMEM104Q8NE00 496 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 CORO2AQ92828 525 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 FAM46BQ96A09 425 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 Q96M66 194 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 GFI1Q99684 422 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 SLC6A7Q99884 636 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 TMEM59Q9BXS4 323 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 TAS2R3Q9NYW6 316 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 TRIM64CA6NLI5 447 aa12.29□□□□□ -0.44
RNF4-210ENST00000508235 MCRIP1C9JLW8 97 aa12.29□□□□□ -0.44
RNF4-210ENST00000508235 GLAP06280 429 aa12.29□□□□□ -0.44
RNF4-210ENST00000508235 FUT3P21217 361 aa12.29□□□□□ -0.44
RNF4-210ENST00000508235 CFPP27918 469 aa12.29□□□□□ -0.44
RNF4-210ENST00000508235 GLIPR1P48060 266 aa12.29□□□□□ -0.44
RNF4-210ENST00000508235 DLX6P56179 175 aa12.29□□□□□ -0.44
RNF4-210ENST00000508235 BRD3OSQ6XYD6 125 aa12.29□□□□□ -0.44
RNF4-210ENST00000508235 GDPGP1Q6ZNW5 385 aa12.29□□□□□ -0.44
RNF4-210ENST00000508235 NEK7Q8TDX7 302 aa12.29□□□□□ -0.44
RNF4-210ENST00000508235 C22orf15Q8WYQ4 148 aa12.29□□□□□ -0.44
RNF4-210ENST00000508235 TNFRSF14Q92956 283 aa12.29□□□□□ -0.44
RNF4-210ENST00000508235 COQ2Q96H96 371 aa12.29□□□□□ -0.44
RNF4-210ENST00000508235 KCTD7Q96MP8 289 aa12.29□□□□□ -0.44
RNF4-210ENST00000508235 CHCHD6Q9BRQ6 235 aa12.29□□□□□ -0.44
RNF4-210ENST00000508235 URM1Q9BTM9 101 aaKnown RBP12.29□□□□□ -0.44
RNF4-210ENST00000508235 STEAP1Q9UHE8 339 aa12.29□□□□□ -0.44
RNF4-210ENST00000508235 MEIKINA0A087WXM9 373 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 ZNF729A6NN14 1252 aaPredicted RBP12.28□□□□□ -0.44
RNF4-210ENST00000508235 IFITM5A6NNB3 132 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 TMEM14DPA8MWL7 114 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 RNASEK-C17orf49H0YIS7 233 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 HILS1P60008 231 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 RPS27AP62979 156 aaKnown RBP12.28□□□□□ -0.44
RNF4-210ENST00000508235 FAM189A2Q15884 450 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 TUSC1Q2TAM9 212 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 MIDNQ504T8 468 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 RSBN1Q5VWQ0 802 aaPredicted RBP12.28□□□□□ -0.44
RNF4-210ENST00000508235 SLC35E4Q6ICL7 350 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 OR52W1Q6IF63 320 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 RAB12Q6IQ22 244 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 TCF23Q7RTU1 214 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 C11orf42Q8N5U0 333 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 OR13D1Q8NGV5 346 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 SLC25A28Q96A46 364 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 OR51E2Q9H255 320 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 ING3Q9NXR8 418 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 RCC2Q9P258 522 aaKnown RBP12.28□□□□□ -0.44
RNF4-210ENST00000508235 FBLN5Q9UBX5 448 aa12.28□□□□□ -0.44
RNF4-210ENST00000508235 LOC100506127A0A0U1RQW1 187 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 TMEM30CPA0ZSE6 113 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 NPFFO15130 113 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 PDCD6O75340 191 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 CA11O75493 328 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 CLPXO76031 633 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 IGHV1-8P0DP01 117 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 GADD45AP24522 165 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 QRFPP83859 136 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 P2RY14Q15391 338 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 RUSC1-AS1Q66K80 236 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 PDZD9Q8IXQ8 264 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 BCL6BQ8N143 479 aaPredicted RBP12.27□□□□□ -0.45
RNF4-210ENST00000508235 OR51D1Q8NGF3 324 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 ZDHHC16Q969W1 377 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 FAM3DQ96BQ1 224 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 NEDD4LQ96PU5 975 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 TM2D1Q9BX74 207 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 KIF25Q9UIL4 384 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 FAM96BQ9Y3D0 163 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 PEX16Q9Y5Y5 336 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 SESN1Q9Y6P5 492 aa12.27□□□□□ -0.45
RNF4-210ENST00000508235 SHISA3A0PJX4 238 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 NOTOA8MTQ0 251 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 TRIM77I1YAP6 450 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 AIPO00170 330 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 GLP1RP43220 463 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 OR10A3P58181 314 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 KLRD1Q13241 179 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 UNC119Q13432 240 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 C2orf76Q3KRA6 126 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 HES5Q5TA89 166 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 HEPN1Q6WQI6 88 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 SIGLECL1Q8N7X8 197 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 PLPPR1Q8TBJ4 325 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 ZFAND2BQ8WV99 257 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 TMEM158Q8WZ71 300 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 PRDM13Q9H4Q3 707 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 ZMAT3Q9HA38 289 aaKnown RBP12.26□□□□□ -0.45
RNF4-210ENST00000508235 RAB9BQ9NP90 201 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 ETAA1Q9NY74 926 aa12.26□□□□□ -0.45
RNF4-210ENST00000508235 SETD2Q9BYW2 2564 aaPredicted RBP12.26□□□□□ -0.45
RNF4-210ENST00000508235 NIPBLQ6KC79 2804 aaeCLIP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms