RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 PLPP3O14495 311 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 CETN3O15182 167 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 TCAPO15273 167 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 PLIN3O60664 434 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 PRSS3P35030 304 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 PTGES3Q15185 160 aaKnown RBP3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 TEX30Q5JUR7 227 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 IDNKQ5T6J7 187 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 PDPK2PQ6A1A2 396 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 CLEC6AQ6EIG7 209 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 AHSA2Q719I0 299 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 SELENOHQ8IZQ5 122 aaKnown RBP3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 GTF2H4Q92759 462 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 RILPQ96NA2 401 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 CATSPER2Q96P56 530 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 TRNT1Q96Q11 434 aaKnown RBP3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 TBL1YQ9BQ87 522 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 BBS2Q9BXC9 721 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 PLEKHF2Q9H8W4 249 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 NRBP2Q9NSY0 501 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 NLE1Q9NVX2 485 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 ENPP5Q9UJA9 477 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 ENPP4Q9Y6X5 453 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 CFAP54Q96N23 3096 aa3.3□□□□□ -1.88
HMGB1P3-201ENST00000502802 USP34Q70CQ2 3546 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 PLXNA4Q9HCM2 1894 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 TRPC5OSA6NMA1 111 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 HLA-DQB1P01920 261 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 CD74P04233 296 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 IL1RNP18510 177 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 IL3RAP26951 378 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 MAGEA3P43357 314 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 KRTAP10-3P60369 221 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 FBXL19-AS1Q494R0 122 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 Q6ZT83 130 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 BHLHA15Q7RTS1 189 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 DEFB128Q7Z7B8 93 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 LRRC6Q86X45 466 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 OR8G5Q8NG78 346 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 OR2L8Q8NGY9 312 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 PDCD6IPQ8WUM4 868 aaKnown RBP3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 IFT81Q8WYA0 676 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 ESR2Q92731 530 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 S100PBPQ96BU1 408 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 ZNF396Q96N95 335 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 ZNF285Q96NJ3 590 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 OR2M4Q96R27 311 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 METTL26Q96S19 204 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 ZNHIT6Q9NWK9 470 aaKnown RBP3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 RFNGQ9Y644 331 aa3.29□□□□□ -1.88
HMGB1P3-201ENST00000502802 ABCB11O95342 1321 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 MUC6Q6W4X9 2439 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 IGHV3-49A0A0A0MS15 119 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 CENPVL3A0A0U1RRI6 287 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 CENPBD1B2RD01 187 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 SGCEO43556 437 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 YEATS4O95619 227 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 CCNE2O96020 404 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 LINC00869P0C866 280 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 PPP1CAP62136 330 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 PMVKQ15126 192 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 OR4D1Q15615 310 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 BSXQ3C1V8 233 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 LINC00483Q53H64 154 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 MTERF4Q7Z6M4 381 aaKnown RBP3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 GAPTQ8N292 157 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 LRRC52Q8N7C0 313 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 OR5T1Q8NG75 326 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 OR13G1Q8NGZ3 307 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 CLHC1Q8NHS4 586 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 CCDC12Q8WUD4 166 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 SLC25A46Q96AG3 418 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 L3HYPDHQ96EM0 354 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 SMIM8Q96KF7 97 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 CHCHD7Q9BUK0 85 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 CCDC94Q9BW85 323 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 SHCBP1LQ9BZQ2 653 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 IFT46Q9NQC8 304 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 MS4A12Q9NXJ0 267 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 PRO0628Q9UI54 55 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 FADS3Q9Y5Q0 445 aa3.28□□□□□ -1.88
HMGB1P3-201ENST00000502802 RAD50Q92878 1312 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 IGKV6-21A0A0C4DH24 114 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 ISPDA4D126 451 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 BET1O15155 118 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 CYTH3O43739 400 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 NDUFS6O75380 124 aaKnown RBP3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 E2F6O75461 281 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 SCO1O75880 301 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 BRI3O95415 125 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 SLC35E2BP0CK96 405 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 MAGEA6P43360 314 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 RAB38P57729 211 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 PFN3P60673 137 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 GRB2P62993 217 aaKnown RBP3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 DEFB103AP81534 67 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 ADIGQ0VDE8 80 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 TPBGQ13641 420 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 SYCP1Q15431 976 aa3.27□□□□□ -1.89
HMGB1P3-201ENST00000502802 HBMQ6B0K9 141 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms