RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 RFNGQ9Y644 331 aa13.83□□□□□ -0.19
SEMA4D-220ENST00000492386 TK1P04183 234 aa13.83□□□□□ -0.2
SEMA4D-220ENST00000492386 ZNF44P15621 663 aa13.83□□□□□ -0.2
SEMA4D-220ENST00000492386 CCNOP22674 350 aa13.83□□□□□ -0.2
SEMA4D-220ENST00000492386 RAB5BP61020 215 aa13.83□□□□□ -0.2
SEMA4D-220ENST00000492386 SSPNQ14714 243 aa13.83□□□□□ -0.2
SEMA4D-220ENST00000492386 SPIN3Q5JUX0 258 aa13.83□□□□□ -0.2
SEMA4D-220ENST00000492386 ZNF695Q8IW36 515 aa13.83□□□□□ -0.2
SEMA4D-220ENST00000492386 GAPTQ8N292 157 aa13.83□□□□□ -0.2
SEMA4D-220ENST00000492386 LILRB1Q8NHL6 650 aaPredicted RBP13.83□□□□□ -0.2
SEMA4D-220ENST00000492386 FAM213BQ8TBF2 198 aa13.83□□□□□ -0.2
SEMA4D-220ENST00000492386 GPHA2Q96T91 129 aa13.83□□□□□ -0.2
SEMA4D-220ENST00000492386 TUBA4BQ9H853 241 aa13.83□□□□□ -0.2
SEMA4D-220ENST00000492386 MTCH1Q9NZJ7 389 aa13.83□□□□□ -0.2
SEMA4D-220ENST00000492386 IGKV1D-13A0A0B4J2D9 117 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 ZNF503-AS2A6NEH8 195 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 SLC22A20A6NK97 555 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 PITX3O75364 302 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 HLA-HP01893 362 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 IGKV1-13P0DP09 117 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 FOXG1P55316 489 aaPredicted RBP13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 CLINT1Q14677 625 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 CEACAM21Q3KPI0 293 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 C6orf15Q6UXA7 325 aaPredicted RBP13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 C20orf24Q9BUV8 137 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 PRRG4Q9BZD6 226 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 FBXO7Q9Y3I1 522 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 FREM2Q5SZK8 3169 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 A0A1B0GW64 132 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 C5orf49A4QMS7 147 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 ZNF724A8MTY0 619 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 UMAD1C9J7I0 102 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 TUSC2O75896 110 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 SRYQ05066 204 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 RNF212Q495C1 297 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 CXorf66Q5JRM2 361 aaPredicted RBP13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 ZNF565Q8N9K5 539 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 TMEM171Q8WVE6 324 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 SPIN2AQ99865 258 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 SPIN2BQ9BPZ2 258 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 SLC35B3Q9H1N7 401 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 LYRM2Q9NU23 88 aaPredicted RBP13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 LRFN1Q9P244 771 aa13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 BOKQ9UMX3 212 aaPredicted RBP13.82□□□□□ -0.2
SEMA4D-220ENST00000492386 IGKV1-6A0A0C4DH72 117 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 PROB1E7EW31 1015 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 M0R036 132 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 ADAM20O43506 726 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 SSSCA1O60232 199 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 MT-ND4LP03901 98 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 CELA3AP09093 270 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 DAOP14920 347 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 ATP6V0CP27449 155 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 LHX2P50458 406 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 ZNF266Q14584 549 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 TSC22D1Q15714 1073 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 NMSQ5H8A3 153 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 ODF3L1Q8IXM7 274 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 ZDHHC23Q8IYP9 409 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 LFNGQ8NES3 379 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 PBDC1Q9BVG4 233 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 MAGT1Q9H0U3 335 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 PLEKHF2Q9H8W4 249 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 LOXL2Q9Y4K0 774 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 KMT2EQ8IZD2 1858 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 A0A1B0GV50 99 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 CLEC18AA5D8T8 446 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 ZNF732B4DXR9 585 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 PRSS44E7EML9 344 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 SS18L1O75177 396 aaPredicted RBP13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 OMGP23515 440 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 MEOX2P50222 304 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 CLDN18P56856 261 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 SNRPEP62304 92 aaKnown RBP13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 TGIF1Q15583 401 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 MRPL21Q7Z2W9 205 aaKnown RBP13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 TUSC5Q8IXB3 177 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 TMEM252Q8N6L7 170 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 CLEC18CQ8NCF0 446 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 ISOC2Q96AB3 205 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 ABHD14BQ96IU4 210 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 SIGLEC12Q96PQ1 595 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 TAAR9Q96RI9 348 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 ZNF703Q9H7S9 590 aaPredicted RBP13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 GLRX2Q9NS18 164 aa13.81□□□□□ -0.2
SEMA4D-220ENST00000492386 A0A1W2PPH5 198 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 C1orf196B1AJZ1 125 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 LINC01387J3KSC0 135 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 HSPB6O14558 160 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 TMEM50AO95807 157 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 UCP1P25874 307 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 MPV17LQ2QL34 196 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 OR2G3Q8NGZ4 309 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 PLPPR1Q8TBJ4 325 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 APOBEC3DQ96AK3 386 aaPredicted RBP13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 ABHD14AQ9BUJ0 271 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 CCL28Q9NRJ3 127 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 A6NLC8 198 aa13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 EIF3GO75821 320 aaKnown RBP eCLIP13.8□□□□□ -0.2
SEMA4D-220ENST00000492386 NEURL1O76050 574 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms