RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 CNIH1O95406 144 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 IFNGP01579 166 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 HSPB1P04792 205 aaKnown RBP10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 ZNF3P17036 446 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 GALEQ14376 348 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 ATXN7L3Q14CW9 347 aaPredicted RBP10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 SPIN3Q5JUX0 258 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 SAMD4BQ5PRF9 694 aaKnown RBP10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 WDR93Q6P2C0 686 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 Q8IYB0 196 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 TMEM104Q8NE00 496 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 TLCD1Q96CP7 247 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 BTBD10Q9BSF8 475 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 EXOSC4Q9NPD3 245 aaKnown RBP10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 PARP11Q9NR21 331 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 CALYQ9NYX4 217 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 IDI2-AS1Q9NZ38 188 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 NUFIP1Q9UHK0 495 aaKnown RBP10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 GTF2A1LQ9UNN4 478 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 GSTK1Q9Y2Q3 226 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 A0A0G2JND7 137 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 PRR32B1ATL7 298 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 SH2D1BO14796 132 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 SOX15O60248 233 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 SOX14O95416 240 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 ALOX5APP20292 161 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 CD1BP29016 333 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 RRM2P31350 389 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 GLP1RP43220 463 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 SCN1BQ07699 218 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 UBE2V2Q15819 145 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 RASSF6Q6ZTQ3 369 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 MINDY2Q8NBR6 621 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 OR2T33Q8NG76 320 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 OR8H1Q8NGG4 311 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 RFESDQ8TAC1 157 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 TMEM106AQ96A25 262 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 FLYWCH2Q96CP2 140 aaKnown RBP10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 RCN3Q96D15 328 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 OSBPL10Q9BXB5 764 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 TTTY10Q9BZA0 68 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 CMC2Q9NRP2 79 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 LAMP5Q9UJQ1 280 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 COPS3Q9UNS2 423 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 BAIAP2Q9UQB8 552 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 AP3M1Q9Y2T2 418 aa10.38□□□□□ -0.75
EXOSC3-207ENST00000490516 A0A0J9YWU9 116 aa10.37□□□□□ -0.75
EXOSC3-207ENST00000490516 A0A1B0GTI1 187 aa10.37□□□□□ -0.75
EXOSC3-207ENST00000490516 GASTP01350 101 aa10.37□□□□□ -0.75
EXOSC3-207ENST00000490516 SF3A3Q12874 501 aaKnown RBP eCLIP10.37□□□□□ -0.75
EXOSC3-207ENST00000490516 METTL21CQ5VZV1 264 aa10.37□□□□□ -0.75
EXOSC3-207ENST00000490516 DEFB125Q8N687 156 aa10.37□□□□□ -0.75
EXOSC3-207ENST00000490516 OR13A1Q8NGR1 328 aa10.37□□□□□ -0.75
EXOSC3-207ENST00000490516 RGP1Q92546 391 aaPredicted RBP10.37□□□□□ -0.75
EXOSC3-207ENST00000490516 LRGUKQ96M69 825 aa10.37□□□□□ -0.75
EXOSC3-207ENST00000490516 WFDC10AQ9H1F0 79 aa10.37□□□□□ -0.75
EXOSC3-207ENST00000490516 ZCCHC4Q9H5U6 513 aa10.37□□□□□ -0.75
EXOSC3-207ENST00000490516 SEMG1P04279 462 aa10.36□□□□□ -0.75
EXOSC3-207ENST00000490516 CSN2P05814 226 aa10.36□□□□□ -0.75
EXOSC3-207ENST00000490516 BLVRBP30043 206 aaPredicted RBP10.36□□□□□ -0.75
EXOSC3-207ENST00000490516 HTR1FP30939 366 aa10.36□□□□□ -0.75
EXOSC3-207ENST00000490516 CD81P60033 236 aa10.36□□□□□ -0.75
EXOSC3-207ENST00000490516 LCN12Q6JVE5 192 aa10.36□□□□□ -0.75
EXOSC3-207ENST00000490516 IL34Q6ZMJ4 242 aa10.36□□□□□ -0.75
EXOSC3-207ENST00000490516 ARPINQ7Z6K5 226 aa10.36□□□□□ -0.75
EXOSC3-207ENST00000490516 MBOAT4Q96T53 435 aa10.36□□□□□ -0.75
EXOSC3-207ENST00000490516 OVOL2Q9BRP0 275 aa10.36□□□□□ -0.75
EXOSC3-207ENST00000490516 MROQ9BYG7 248 aa10.36□□□□□ -0.75
EXOSC3-207ENST00000490516 HMG20AQ9NP66 347 aa10.36□□□□□ -0.75
EXOSC3-207ENST00000490516 MRM2Q9UI43 246 aaKnown RBP10.36□□□□□ -0.75
EXOSC3-207ENST00000490516 V9GYY5 206 aaPredicted RBP10.36□□□□□ -0.75
EXOSC3-207ENST00000490516 HERC1Q15751 4861 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 IGHV7-81A0A0B4J1V7 117 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 A0A1W2PN81 502 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 TPPPO94811 219 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 IL1AP01583 271 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 ZNF44P15621 663 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 CHRNA7P36544 502 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 FUT6P51993 359 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 RAB40BQ12829 278 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 MAPRE2Q15555 327 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 ECSCRQ19T08 205 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 ZNF829Q3KNS6 432 aaPredicted RBP10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 DEGS2Q6QHC5 323 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 IQCF1Q8N6M8 205 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 YIPF7Q8N8F6 280 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 RTN4IP1Q8WWV3 396 aaPredicted RBP10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 BORCS8Q96FH0 119 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 KCTD14Q9BQ13 255 aaPredicted RBP10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 NEURL2Q9BR09 285 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 SRD5A3Q9H8P0 318 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 PLEKHA1Q9HB21 404 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 KRT84Q9NSB2 600 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 INTS9Q9NV88 658 aaKnown RBP10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 KIF25Q9UIL4 384 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 SAMD4AQ9UPU9 718 aaKnown RBP10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 FAT2Q9NYQ8 4349 aa10.35□□□□□ -0.75
EXOSC3-207ENST00000490516 SLC33A1O00400 549 aaPredicted RBP10.34□□□□□ -0.75
EXOSC3-207ENST00000490516 SRSF10O75494 262 aaKnown RBP10.34□□□□□ -0.75
EXOSC3-207ENST00000490516 CD7P09564 240 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms