RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 ASIPP42127 132 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 CDKN2BP42772 138 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 ZNF133P52736 654 aaPredicted RBP3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 OR4D2P58180 307 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 SNRPD2P62316 118 aaKnown RBP3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 EMX1Q04741 257 aaPredicted RBP3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 OR7A5Q15622 319 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 MPPED2Q15777 294 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 HIKESHIQ53FT3 197 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 LELP1Q5T871 98 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 RWDD4Q6NW29 188 aaKnown RBP3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 DNAJC24Q6P3W2 148 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 TEX43Q6ZNM6 134 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 MKXQ8IYA7 352 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 JAGN1Q8N5M9 183 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 ZNF321PQ8N8H1 164 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 OR2A1Q8NGT9 310 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 BLOC1S5Q8TDH9 187 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 ANKRD60Q9BZ19 345 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 PIGUQ9H490 435 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 C16orf95Q9H693 158 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 ACP6Q9NPH0 428 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 ZNF331Q9NQX6 463 aaPredicted RBP3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 KCNE1BA0A087WTH5 132 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 A8MU10 97 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 C11orf94C9JXX5 98 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 L7N2F9 121 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 SS18L1O75177 396 aaPredicted RBP3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 POP7O75817 140 aaKnown RBP3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 OR2J2O76002 312 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 RAB3DO95716 219 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 LSM8O95777 96 aaKnown RBP3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 IGLV2-23P01705 113 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 EIF4EP06730 217 aaKnown RBP3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 OR5H8P0DN80 308 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 PRPS2P11908 318 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 DEKP35659 375 aaKnown RBP3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 CEACAM3P40198 252 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 SPINT3P49223 89 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 UBE2AP49459 152 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 RAB7AP51149 207 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 BCAP31P51572 246 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 CLDN8P56748 225 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 MAB21L1Q13394 359 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 ZNF726P1Q15940 193 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 KRT71Q3SY84 523 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 HES5Q5TA89 166 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 SBSNQ6UWP8 590 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 ZNF786Q8N393 782 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 STPG2Q8N412 459 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 TMEM86BQ8N661 226 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 OR4S2Q8NH73 311 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 CD300LFQ8TDQ1 290 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 GPX8Q8TED1 209 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 GLYATL2Q8WU03 294 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 LRRC29Q8WV35 223 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 TSLPQ969D9 159 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 JSRP1Q96MG2 331 aaPredicted RBP3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 BCL7BQ9BQE9 202 aa3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 SOX21Q9Y651 276 aaPredicted RBP3.19□□□□□ -1.9
SSX2IP-208ENST00000490476 PLAC8L1A1L4L8 177 aa3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 GABARAPO95166 117 aa3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 KRT16P08779 473 aa3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 CSNK2A2P19784 350 aaPredicted RBP3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 F2RP25116 425 aa3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 PEBP1P30086 187 aaKnown RBP3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 CDK9P50750 372 aaKnown RBP3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 RAB11AP62491 216 aa3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 RAB11BQ15907 218 aa3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 POU2AF1Q16633 256 aa3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 HDDC2Q7Z4H3 204 aa3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 MRPL55Q7Z7F7 128 aaKnown RBP3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 OR10J6PQ8NGY7 276 aa3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 APH1BQ8WW43 257 aa3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 POTEKPQ9BYX7 375 aa3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 DRC3Q9H069 523 aa3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 CLSTN2Q9H4D0 955 aa3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 TMEM38AQ9H6F2 299 aa3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 UVRAGQ9P2Y5 699 aa3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 ZMAT5Q9UDW3 170 aaKnown RBP3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 ZNF223Q9UK11 482 aaPredicted RBP3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 PPIL1Q9Y3C6 166 aa3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 RHBDD3Q9Y3P4 386 aa3.18□□□□□ -1.9
SSX2IP-208ENST00000490476 ARPC4-TTLL3A0A0A6YYG9 625 aa3.17□□□□□ -1.9
SSX2IP-208ENST00000490476 A0A0J9YYE9 177 aa3.17□□□□□ -1.9
SSX2IP-208ENST00000490476 SLC22A20A6NK97 555 aa3.17□□□□□ -1.9
SSX2IP-208ENST00000490476 C16orf90A8MZG2 172 aa3.17□□□□□ -1.9
SSX2IP-208ENST00000490476 H7C0C1 242 aa3.17□□□□□ -1.9
SSX2IP-208ENST00000490476 SIVA1O15304 175 aa3.17□□□□□ -1.9
SSX2IP-208ENST00000490476 TRBC1P01850 177 aa3.17□□□□□ -1.9
SSX2IP-208ENST00000490476 HLA-HP01893 362 aa3.17□□□□□ -1.9
SSX2IP-208ENST00000490476 UBTFL6P0CB48 400 aaPredicted RBP3.17□□□□□ -1.9
SSX2IP-208ENST00000490476 NR2C1P13056 603 aa3.17□□□□□ -1.9
SSX2IP-208ENST00000490476 RAB3BP20337 219 aa3.17□□□□□ -1.9
SSX2IP-208ENST00000490476 IL32P24001 234 aa3.17□□□□□ -1.9
SSX2IP-208ENST00000490476 RPS15AP62244 130 aaKnown RBP3.17□□□□□ -1.9
SSX2IP-208ENST00000490476 ZNF266Q14584 549 aa3.17□□□□□ -1.9
SSX2IP-208ENST00000490476 GINS1Q14691 196 aa3.17□□□□□ -1.9
SSX2IP-208ENST00000490476 RGNQ15493 299 aa3.17□□□□□ -1.9
SSX2IP-208ENST00000490476 DEFB112Q30KQ8 113 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms