RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 MBOAT7Q96N66 472 aa0.23□□□□□ -2.37
CCDC93-209ENST00000488908 OLFM3Q96PB7 478 aa0.23□□□□□ -2.37
CCDC93-209ENST00000488908 GPR22Q99680 433 aa0.23□□□□□ -2.37
CCDC93-209ENST00000488908 C20orf144Q9BQM9 153 aa0.23□□□□□ -2.37
CCDC93-209ENST00000488908 ANP32EQ9BTT0 268 aa0.23□□□□□ -2.37
CCDC93-209ENST00000488908 SLC38A1Q9H2H9 487 aa0.23□□□□□ -2.37
CCDC93-209ENST00000488908 C12orf4Q9NQ89 552 aa0.23□□□□□ -2.37
CCDC93-209ENST00000488908 DDX18Q9NVP1 670 aaKnown RBP0.23□□□□□ -2.37
CCDC93-209ENST00000488908 RAB20Q9NX57 234 aa0.23□□□□□ -2.37
CCDC93-209ENST00000488908 DNAJC27Q9NZQ0 273 aa0.23□□□□□ -2.37
CCDC93-209ENST00000488908 PSMD13Q9UNM6 376 aa0.23□□□□□ -2.37
CCDC93-209ENST00000488908 BTRCQ9Y297 605 aa0.23□□□□□ -2.37
CCDC93-209ENST00000488908 PHLDA3Q9Y5J5 127 aa0.23□□□□□ -2.37
CCDC93-209ENST00000488908 PUS1Q9Y606 427 aaKnown RBP eCLIP0.23□□□□□ -2.37
CCDC93-209ENST00000488908 CACNA1SQ13698 1873 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 ANKRD17O75179 2603 aaKnown RBP0.22□□□□□ -2.37
CCDC93-209ENST00000488908 WDR19Q8NEZ3 1342 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 USP42Q9H9J4 1324 aaKnown RBP0.22□□□□□ -2.37
CCDC93-209ENST00000488908 A0A1W2PRF3 423 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 A0A1W2PRM7 423 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 IGSF23A1L1A6 192 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 PGPA6NDG6 321 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 ARRDC5A6NEK1 342 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 ARGFXA6NJG6 315 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 ZNF99A8MXY4 864 aaPredicted RBP0.22□□□□□ -2.37
CCDC93-209ENST00000488908 ZNF593O00488 134 aaPredicted RBP0.22□□□□□ -2.37
CCDC93-209ENST00000488908 SIVA1O15304 175 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 NQO1P15559 274 aaKnown RBP0.22□□□□□ -2.37
CCDC93-209ENST00000488908 PMCHP20382 165 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 CD9P21926 228 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 GABRR2P28476 465 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 S100A2P29034 98 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 SPAM1P38567 509 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 XKP51811 444 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 SLC35B1P78383 322 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 IRF8Q02556 426 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 RELAQ04206 551 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 HTR4Q13639 388 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 IL18Q14116 193 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 OR8G1Q15617 311 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 NXNL2Q5VZ03 156 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 EPGNQ6UW88 154 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 CMTM8Q8IZV2 173 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 BBOF1Q8ND07 529 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 CCDC148Q8NFR7 591 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 OR11G2Q8NGC1 345 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 LHFPL5Q8TAF8 219 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 NDNFQ8TB73 568 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 CD200R1Q8TD46 325 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 KCTD4Q8WVF5 259 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 REEP6Q96HR9 211 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 BPIFA3Q9BQP9 254 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 ZNF436Q9C0F3 470 aaPredicted RBP0.22□□□□□ -2.37
CCDC93-209ENST00000488908 EXO5Q9H790 373 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 ANXA10Q9UJ72 324 aa0.22□□□□□ -2.37
CCDC93-209ENST00000488908 YLPM1P49750 1951 aaKnown RBP0.22□□□□□ -2.37
CCDC93-209ENST00000488908 ARHGAP32A7KAX9 2087 aa0.22□□□□□ -2.38
CCDC93-209ENST00000488908 ATRNO75882 1429 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 CLUHO75153 1309 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 IGKV3D-7A0A0C4DH55 119 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 IGKV3OR2-268A0A0C4DH90 116 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 CCDC169A6NNP5 214 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 WRBO00258 174 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 TOR1AO14656 332 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 TCF21O43680 179 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 TRAPPC6AO75865 159 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 OR4A8P0C604 315 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 EVI2BP34910 448 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 LPAR6P43657 344 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 GPR4P46093 362 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 AKR1C2P52895 323 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 OR2B6P58173 313 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 APOFQ13790 326 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 CEACAM21Q3KPI0 293 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 TIMM23BQ5SRD1 257 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 SLC35D2Q76EJ3 337 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 MARCH3Q86UD3 253 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 CA13Q8N1Q1 262 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 COMMD1Q8N668 190 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 OR4X2Q8NGF9 303 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 OR51Q1Q8NH59 317 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 ZNRF2Q8NHG8 242 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 PIH1D2Q8WWB5 315 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 CCL17Q92583 94 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 TSSK6Q9BXA6 273 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 SMDT1Q9H4I9 107 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 VCX3AQ9NNX9 186 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 DDIT4Q9NX09 232 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 RBM12B-AS1Q9P1G2 102 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 MRPS16Q9Y3D3 137 aaKnown RBP0.21□□□□□ -2.38
CCDC93-209ENST00000488908 MINOS1-NBL1R4GNA1 71 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 DENND4BO75064 1496 aaPredicted RBP0.21□□□□□ -2.38
CCDC93-209ENST00000488908 RTTNQ86VV8 2226 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 DLG5Q8TDM6 1919 aa0.21□□□□□ -2.38
CCDC93-209ENST00000488908 ROS1P08922 2347 aa0.2□□□□□ -2.38
CCDC93-209ENST00000488908 COL18A1P39060 1754 aa0.2□□□□□ -2.38
CCDC93-209ENST00000488908 IGKV3-7A0A075B6H7 116 aa0.2□□□□□ -2.38
CCDC93-209ENST00000488908 TRAV8-3A0A0A6YYJ7 113 aa0.2□□□□□ -2.38
CCDC93-209ENST00000488908 TRAV25A0A0B4J276 109 aa0.2□□□□□ -2.38
CCDC93-209ENST00000488908 CTAGE15A4D2H0 777 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms