RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 UBE2V1Q13404 147 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 CDCP2Q5VXM1 449 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 H1FNTQ75WM6 255 aaPredicted RBP10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 AGBL5Q8NDL9 886 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 TECTBQ96PL2 329 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 LRRC61Q9BV99 259 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 FOXQ1Q9C009 403 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 SDF2L1Q9HCN8 221 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 SOHLH2Q9NX45 425 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 KLHL13Q9P2N7 655 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 MRPS28Q9Y2Q9 187 aaKnown RBP10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 THADAQ6YHU6 1953 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 FAM230AA0A1W2PPH8 454 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 ZNF20P17024 532 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 ZNF43P17038 809 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 GPR157Q5UAW9 335 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 CST9LP1Q5W188 147 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 SP5Q6BEB4 398 aaPredicted RBP10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 GLIPR1L1Q6UWM5 242 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 C16orf82Q7Z2V1 217 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 OR5AS1Q8N127 324 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 OR8G5Q8NG78 346 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 THAP3Q8WTV1 239 aaPredicted RBP10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 TMEM234Q8WY98 164 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 C11orf40Q8WZ69 217 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 DAZLQ92904 295 aaKnown RBP10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 PYGO2Q9BRQ0 406 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 GNG13Q9P2W3 67 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 COL6A3P12111 3177 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 A0A0U1RQV5 110 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 ANKUB1A6NFN9 424 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 SOCS1O15524 211 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 GABRG2P18507 467 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 TMEM241Q24JQ0 296 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 C9orf50Q5SZB4 431 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 ST8SIA1Q92185 356 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 ST6GALNAC5Q9BVH7 336 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 TMEM59Q9BXS4 323 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 EHFQ9NZC4 300 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 ZNF319Q9P2F9 582 aa10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 PHF3Q92576 2039 aaKnown RBP10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 TDRD6O60522 2096 aaKnown RBP10.05□□□□□ -0.8
SEC61A1-205ENST00000483956 IGHV5-51A0A0C4DH38 117 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 LOC102723971A0A1B0GUV8 181 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 DBHP09172 617 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 DRD1P21728 446 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 EFNA3P52797 238 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 TMEM50BP56557 158 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 ACTL10Q5JWF8 245 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 OR5L2Q8NGL0 311 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 RBKSQ9H477 322 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 IGFLR1Q9H665 355 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 COPS7AQ9UBW8 275 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 C14orf166Q9Y224 244 aaKnown RBP10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 H3BMH7 237 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 MPIG6BO95866 241 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 TAS2R46P59540 309 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 POU3F1Q03052 451 aaPredicted RBP10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 IL24Q13007 206 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 KIAA0895LQ68EN5 471 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 TEX43Q6ZNM6 134 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 EMG1Q92979 244 aaKnown RBP10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 PGAM5Q96HS1 289 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 VN1R1Q9GZP7 353 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 CSTL1Q9H114 145 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 ZFP92A6NM28 416 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 OR1D4P47884 311 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 ZNF41P51814 821 aaPredicted RBP10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 CNN1P51911 297 aaKnown RBP10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 TMEM183BQ1AE95 376 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 SP6Q3SY56 376 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 TPTE2P1Q5T6R2 138 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 RNF144BQ7Z419 303 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 OR51E1Q8TCB6 317 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 SSC4DQ8WTU2 575 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 NUDT11Q96G61 164 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 CTDSP1Q9GZU7 261 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 MTIF3Q9H2K0 278 aaKnown RBP10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 SLC7A11Q9UPY5 501 aa10.04□□□□□ -0.8
SEC61A1-205ENST00000483956 YPEL1O60688 119 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 CCL1P22362 96 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 OMGP23515 440 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 OR3A4PP47883 348 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 GFERP55789 205 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 FAM3BP58499 235 aaPredicted RBP10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 EWSR1Q01844 656 aaKnown RBP eCLIP10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 TLE3Q04726 772 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 EIF3IQ13347 325 aaKnown RBP10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 SHHQ15465 462 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 ADIRFQ15847 76 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 TGIF2LYQ8IUE0 185 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 FAM89BQ8N5H3 189 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 YPEL2Q96QA6 119 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 VAMP8Q9BV40 100 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 GPR84Q9NQS5 396 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 TUBG2Q9NRH3 451 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 MED29Q9NX70 200 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 RP1P56715 2156 aa10.03□□□□□ -0.8
SEC61A1-205ENST00000483956 A0A1W2PNV4 684 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms