RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 OCMP0CE72 109 aaPredicted RBP12.56□□□□□ -0.4
DDX56-210ENST00000479440 GNG10P50151 68 aa12.56□□□□□ -0.4
DDX56-210ENST00000479440 SCN1BQ07699 218 aa12.56□□□□□ -0.4
DDX56-210ENST00000479440 EBI3Q14213 229 aa12.56□□□□□ -0.4
DDX56-210ENST00000479440 DIAPH2-AS1Q14236 149 aa12.56□□□□□ -0.4
DDX56-210ENST00000479440 UTF1Q5T230 341 aa12.56□□□□□ -0.4
DDX56-210ENST00000479440 CATSPERDQ86XM0 798 aa12.56□□□□□ -0.4
DDX56-210ENST00000479440 ZNF565Q8N9K5 539 aa12.56□□□□□ -0.4
DDX56-210ENST00000479440 LEAP2Q969E1 77 aa12.56□□□□□ -0.4
DDX56-210ENST00000479440 SPSB1Q96BD6 273 aa12.56□□□□□ -0.4
DDX56-210ENST00000479440 PPIL3Q9H2H8 161 aaKnown RBP12.56□□□□□ -0.4
DDX56-210ENST00000479440 IDI2-AS1Q9NZ38 188 aa12.56□□□□□ -0.4
DDX56-210ENST00000479440 LOC107986453A0A1B0GWG9 222 aa12.55□□□□□ -0.4
DDX56-210ENST00000479440 SLC33A1O00400 549 aaPredicted RBP12.55□□□□□ -0.4
DDX56-210ENST00000479440 KDM4BO94953 1096 aa12.55□□□□□ -0.4
DDX56-210ENST00000479440 IL1AP01583 271 aa12.55□□□□□ -0.4
DDX56-210ENST00000479440 IGHV3-7P01780 117 aa12.55□□□□□ -0.4
DDX56-210ENST00000479440 UBCP0CG48 685 aaKnown RBP12.55□□□□□ -0.4
DDX56-210ENST00000479440 OR5H8P0DN80 308 aa12.55□□□□□ -0.4
DDX56-210ENST00000479440 ANXA8P13928 327 aa12.55□□□□□ -0.4
DDX56-210ENST00000479440 PSMB8P28062 276 aa12.55□□□□□ -0.4
DDX56-210ENST00000479440 CFHR3Q02985 330 aa12.55□□□□□ -0.4
DDX56-210ENST00000479440 ZNF616Q08AN1 781 aa12.55□□□□□ -0.4
DDX56-210ENST00000479440 ZNF816Q0VGE8 651 aaPredicted RBP12.55□□□□□ -0.4
DDX56-210ENST00000479440 PDZK1IP1Q13113 114 aa12.55□□□□□ -0.4
DDX56-210ENST00000479440 Q8N9W7 124 aa12.55□□□□□ -0.4
DDX56-210ENST00000479440 OR2T10Q8NGZ9 312 aa12.55□□□□□ -0.4
DDX56-210ENST00000479440 EAF1Q96JC9 268 aaPredicted RBP12.55□□□□□ -0.4
DDX56-210ENST00000479440 RASL11BQ9BPW5 248 aa12.55□□□□□ -0.4
DDX56-210ENST00000479440 TM2D3Q9BRN9 247 aa12.55□□□□□ -0.4
DDX56-210ENST00000479440 ADGRL4Q9HBW9 690 aa12.55□□□□□ -0.4
DDX56-210ENST00000479440 PSG11Q9UQ72 335 aa12.55□□□□□ -0.4
DDX56-210ENST00000479440 LDLRAD4O15165 306 aa12.54□□□□□ -0.4
DDX56-210ENST00000479440 SAP30O75446 220 aa12.54□□□□□ -0.4
DDX56-210ENST00000479440 GP9P14770 177 aa12.54□□□□□ -0.4
DDX56-210ENST00000479440 ZNF20P17024 532 aa12.54□□□□□ -0.4
DDX56-210ENST00000479440 ATF1P18846 271 aa12.54□□□□□ -0.4
DDX56-210ENST00000479440 C21orf33P30042 268 aaPredicted RBP12.54□□□□□ -0.4
DDX56-210ENST00000479440 SLC16A12Q6ZSM3 486 aa12.54□□□□□ -0.4
DDX56-210ENST00000479440 MOB3BQ86TA1 216 aa12.54□□□□□ -0.4
DDX56-210ENST00000479440 ARHGAP24Q8N264 748 aa12.54□□□□□ -0.4
DDX56-210ENST00000479440 DNAJC9Q8WXX5 260 aa12.54□□□□□ -0.4
DDX56-210ENST00000479440 RFT1Q96AA3 541 aa12.54□□□□□ -0.4
DDX56-210ENST00000479440 LRGUKQ96M69 825 aa12.54□□□□□ -0.4
DDX56-210ENST00000479440 OPALINQ96PE5 141 aa12.54□□□□□ -0.4
DDX56-210ENST00000479440 EDA2RQ9HAV5 297 aa12.54□□□□□ -0.4
DDX56-210ENST00000479440 NEK6Q9HC98 313 aa12.54□□□□□ -0.4
DDX56-210ENST00000479440 H2AFY2Q9P0M6 372 aaPredicted RBP12.54□□□□□ -0.4
DDX56-210ENST00000479440 HYDINQ4G0P3 5121 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 MEIKINA0A087WXM9 373 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 IGHV1-3A0A0C4DH29 117 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 IGKV1-9A0A0C4DH69 117 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 OVOL1O14753 267 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 PRKYO43930 277 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 GAPDHP04406 335 aaKnown RBP12.53□□□□□ -0.4
DDX56-210ENST00000479440 VEGFCP49767 419 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 LTC4SQ16873 150 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 NXNL2Q5VZ03 156 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 UTS2BQ765I0 119 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 TMEM179BQ7Z7N9 219 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 Q8N6K4 173 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 OR10A7Q8NGE5 316 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 OR8H1Q8NGG4 311 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 OR6Q1Q8NGQ2 317 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 OR1N2Q8NGR9 330 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 UBE2E2Q96LR5 201 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 ZNF580Q9UK33 172 aa12.53□□□□□ -0.4
DDX56-210ENST00000479440 IGHV3-72A0A0B4J1Y9 119 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 IGKV1-12A0A0C4DH73 117 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 HSPB6O14558 160 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 DEGS1O15121 323 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 IGKV1D-12P01611 117 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 CGB3P0DN86 165 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 CGB7P0DN87 165 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 SPNP16150 400 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 REG1BP48304 166 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 RUNX1Q01196 453 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 GABPB1Q06547 395 aaPredicted RBP12.52□□□□□ -0.41
DDX56-210ENST00000479440 TRIM25Q14258 630 aaKnown RBP12.52□□□□□ -0.41
DDX56-210ENST00000479440 Q6P435 159 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 TMEM65Q6PI78 240 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 SSX6Q7RTT6 188 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 GID4Q8IVV7 300 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 OR51T1Q8NGJ9 327 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 OR5D18Q8NGL1 313 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 OR13A1Q8NGR1 328 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 MYOZ3Q8TDC0 251 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 ADAT3Q96EY9 351 aaPredicted RBP12.52□□□□□ -0.41
DDX56-210ENST00000479440 KCTD7Q96MP8 289 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 TBX5Q99593 518 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 OSBPL10Q9BXB5 764 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 FAM107BQ9H098 131 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 GHITMQ9H3K2 345 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 NCOR1P1Q9H4R4 102 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 LINC00574Q9H8X3 128 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 ARL8BQ9NVJ2 186 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 KIF25Q9UIL4 384 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 VSIG4Q9Y279 399 aa12.52□□□□□ -0.41
DDX56-210ENST00000479440 METTL15A6NJ78 407 aa12.51□□□□□ -0.41
DDX56-210ENST00000479440 I3L521 148 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms