RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 ATXN7L3Q14CW9 347 aaPredicted RBP11.68□□□□□ -0.54
SMG5-204ENST00000476954 RFESDQ8TAC1 157 aa11.68□□□□□ -0.54
SMG5-204ENST00000476954 KCTD14Q9BQ13 255 aaPredicted RBP11.68□□□□□ -0.54
SMG5-204ENST00000476954 CCDC134Q9H6E4 229 aa11.68□□□□□ -0.54
SMG5-204ENST00000476954 SAR1AQ9NR31 198 aa11.68□□□□□ -0.54
SMG5-204ENST00000476954 CALYQ9NYX4 217 aa11.68□□□□□ -0.54
SMG5-204ENST00000476954 BAIAP2Q9UQB8 552 aa11.68□□□□□ -0.54
SMG5-204ENST00000476954 GSTK1Q9Y2Q3 226 aa11.68□□□□□ -0.54
SMG5-204ENST00000476954 AP3M1Q9Y2T2 418 aa11.68□□□□□ -0.54
SMG5-204ENST00000476954 DNAH6Q9C0G6 4158 aa11.68□□□□□ -0.54
SMG5-204ENST00000476954 FAT2Q9NYQ8 4349 aa11.68□□□□□ -0.54
SMG5-204ENST00000476954 TRBV2A0A0J9YWF9 115 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 FUOMA2VDF0 154 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 NUPR2A6NF83 97 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 SOX15O60248 233 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 MOSP00540 346 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 GAPDHP04406 335 aaKnown RBP11.67□□□□□ -0.54
SMG5-204ENST00000476954 GLP1RP43220 463 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 CDC42P60953 191 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 MAPRE2Q15555 327 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 GLYATQ6IB77 296 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 CEMP1Q6PRD7 247 aaPredicted RBP11.67□□□□□ -0.54
SMG5-204ENST00000476954 ARPINQ7Z6K5 226 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 TMEM104Q8NE00 496 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 OR13A1Q8NGR1 328 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 OR10X1Q8NGY0 326 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 ELOVL1Q9BW60 279 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 OSBPL10Q9BXB5 764 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 EXOSC4Q9NPD3 245 aaKnown RBP11.67□□□□□ -0.54
SMG5-204ENST00000476954 PARP11Q9NR21 331 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 IDI2-AS1Q9NZ38 188 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 OR6C3Q9NZP0 311 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 LAMP5Q9UJQ1 280 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 DNAH17Q9UFH2 4485 aa11.67□□□□□ -0.54
SMG5-204ENST00000476954 TRAV41A0A0B4J266 112 aa11.66□□□□□ -0.54
SMG5-204ENST00000476954 IZUMO1RA6ND01 250 aa11.66□□□□□ -0.54
SMG5-204ENST00000476954 MAGEB4O15481 346 aaPredicted RBP11.66□□□□□ -0.54
SMG5-204ENST00000476954 SRSF10O75494 262 aaKnown RBP11.66□□□□□ -0.54
SMG5-204ENST00000476954 PRR20EP86478 221 aa11.66□□□□□ -0.54
SMG5-204ENST00000476954 PRR20CP86479 221 aa11.66□□□□□ -0.54
SMG5-204ENST00000476954 PRR20DP86480 221 aa11.66□□□□□ -0.54
SMG5-204ENST00000476954 PRR20BP86481 221 aa11.66□□□□□ -0.54
SMG5-204ENST00000476954 PRR20AP86496 221 aa11.66□□□□□ -0.54
SMG5-204ENST00000476954 PPP1R8Q12972 351 aaKnown RBP11.66□□□□□ -0.54
SMG5-204ENST00000476954 BNIP1Q12981 228 aa11.66□□□□□ -0.54
SMG5-204ENST00000476954 PLEKHG7Q6ZR37 379 aa11.66□□□□□ -0.54
SMG5-204ENST00000476954 INTS9Q9NV88 658 aaKnown RBP11.66□□□□□ -0.54
SMG5-204ENST00000476954 SAMD4AQ9UPU9 718 aaKnown RBP11.66□□□□□ -0.54
SMG5-204ENST00000476954 MRPS28Q9Y2Q9 187 aaKnown RBP11.66□□□□□ -0.54
SMG5-204ENST00000476954 SH2D1BO14796 132 aa11.65□□□□□ -0.54
SMG5-204ENST00000476954 RGS11O94810 467 aa11.65□□□□□ -0.54
SMG5-204ENST00000476954 GALEQ14376 348 aa11.65□□□□□ -0.54
SMG5-204ENST00000476954 SPIN3Q5JUX0 258 aa11.65□□□□□ -0.54
SMG5-204ENST00000476954 GTSCR1Q86UQ5 136 aa11.65□□□□□ -0.54
SMG5-204ENST00000476954 AQP11Q8NBQ7 271 aa11.65□□□□□ -0.54
SMG5-204ENST00000476954 BBS1Q8NFJ9 593 aa11.65□□□□□ -0.54
SMG5-204ENST00000476954 DYDC1Q8WWB3 177 aa11.65□□□□□ -0.54
SMG5-204ENST00000476954 PYURFQ96I23 114 aa11.65□□□□□ -0.54
SMG5-204ENST00000476954 WFDC10AQ9H1F0 79 aa11.65□□□□□ -0.54
SMG5-204ENST00000476954 ZCCHC4Q9H5U6 513 aa11.65□□□□□ -0.54
SMG5-204ENST00000476954 HMG20AQ9NP66 347 aa11.65□□□□□ -0.54
SMG5-204ENST00000476954 COPS3Q9UNS2 423 aa11.65□□□□□ -0.54
SMG5-204ENST00000476954 HERC1Q15751 4861 aa11.64□□□□□ -0.55
SMG5-204ENST00000476954 DNAH2Q9P225 4427 aa11.64□□□□□ -0.55
SMG5-204ENST00000476954 TRAV39A0A0B4J263 110 aa11.64□□□□□ -0.55
SMG5-204ENST00000476954 SHISA3A0PJX4 238 aa11.64□□□□□ -0.55
SMG5-204ENST00000476954 HSPB1P04792 205 aaKnown RBP11.64□□□□□ -0.55
SMG5-204ENST00000476954 ZNF44P15621 663 aa11.64□□□□□ -0.55
SMG5-204ENST00000476954 BLVRBP30043 206 aaPredicted RBP11.64□□□□□ -0.55
SMG5-204ENST00000476954 HTR1FP30939 366 aa11.64□□□□□ -0.55
SMG5-204ENST00000476954 FUT6P51993 359 aa11.64□□□□□ -0.55
SMG5-204ENST00000476954 ZNF829Q3KNS6 432 aaPredicted RBP11.64□□□□□ -0.55
SMG5-204ENST00000476954 LGALS9CQ6DKI2 356 aa11.64□□□□□ -0.55
SMG5-204ENST00000476954 C8orf82Q6P1X6 216 aaPredicted RBP11.64□□□□□ -0.55
SMG5-204ENST00000476954 Q6P435 159 aa11.64□□□□□ -0.55
SMG5-204ENST00000476954 IL34Q6ZMJ4 242 aa11.64□□□□□ -0.55
SMG5-204ENST00000476954 Q8IYB0 196 aa11.64□□□□□ -0.55
SMG5-204ENST00000476954 ELMOD2Q8IZ81 293 aa11.64□□□□□ -0.55
SMG5-204ENST00000476954 MINDY2Q8NBR6 621 aa11.64□□□□□ -0.55
SMG5-204ENST00000476954 MROQ9BYG7 248 aa11.64□□□□□ -0.55
SMG5-204ENST00000476954 CHCHD3Q9NX63 227 aaKnown RBP11.64□□□□□ -0.55
SMG5-204ENST00000476954 KIF25Q9UIL4 384 aa11.64□□□□□ -0.55
SMG5-204ENST00000476954 MYRFQ9Y2G1 1151 aa11.64□□□□□ -0.55
SMG5-204ENST00000476954 IGKV1-12A0A0C4DH73 117 aa11.63□□□□□ -0.55
SMG5-204ENST00000476954 A0A1B0GVY2 172 aa11.63□□□□□ -0.55
SMG5-204ENST00000476954 LOC110117498-PIK3R3F6TDL0 507 aa11.63□□□□□ -0.55
SMG5-204ENST00000476954 SLC33A1O00400 549 aaPredicted RBP11.63□□□□□ -0.55
SMG5-204ENST00000476954 EDF1O60869 148 aaKnown RBP11.63□□□□□ -0.55
SMG5-204ENST00000476954 IL1AP01583 271 aa11.63□□□□□ -0.55
SMG5-204ENST00000476954 IGKV1D-12P01611 117 aa11.63□□□□□ -0.55
SMG5-204ENST00000476954 FABP3P05413 133 aa11.63□□□□□ -0.55
SMG5-204ENST00000476954 CSN2P05814 226 aa11.63□□□□□ -0.55
SMG5-204ENST00000476954 MRPL3P09001 348 aaKnown RBP11.63□□□□□ -0.55
SMG5-204ENST00000476954 CD1BP29016 333 aa11.63□□□□□ -0.55
SMG5-204ENST00000476954 ODF4Q2M2E3 257 aa11.63□□□□□ -0.55
SMG5-204ENST00000476954 BCL2L15Q5TBC7 163 aa11.63□□□□□ -0.55
SMG5-204ENST00000476954 DEGS2Q6QHC5 323 aa11.63□□□□□ -0.55
SMG5-204ENST00000476954 Q6ZSR3 168 aa11.63□□□□□ -0.55
SMG5-204ENST00000476954 DEFB125Q8N687 156 aa11.63□□□□□ -0.55
SMG5-204ENST00000476954 RTN4IP1Q8WWV3 396 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms