RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 CDK5Q00535 292 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 PPIDQ08752 370 aaKnown RBP3□□□□□ -1.93
VPS13D-207ENST00000476169 PPP1R1AQ13522 171 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 CASP8Q14790 479 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 SPA17Q15506 151 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 C15orf32Q32M92 178 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 KRTAP27-1Q3LI81 207 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 SPOPLQ6IQ16 392 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 CD200R1LQ6Q8B3 271 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 LYPD2Q6UXB3 125 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 FAM231DQ6ZW35 169 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 GATD1Q8NB37 220 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 SUMF2Q8NBJ7 301 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 SLC26A10Q8NG04 563 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 OR4M2Q8NGB6 313 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 OR10G4Q8NGN3 311 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 RNF138Q8WVD3 245 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 TMEM158Q8WZ71 300 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 HGDQ93099 445 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 PTX4Q96A99 478 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 OR10C1Q96KK4 312 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 PACRGQ96M98 296 aaPredicted RBP3□□□□□ -1.93
VPS13D-207ENST00000476169 OR4K3Q96R72 315 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 TAAR1Q96RJ0 339 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 SUCNR1Q9BXA5 334 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 MS4A6AQ9H2W1 248 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 TP53TG1Q9Y2A0 90 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 CSAG2Q9Y5P2 127 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 INSIG2Q9Y5U4 225 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 ALG5Q9Y673 324 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 SHPRHQ149N8 1683 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 BRCA1P38398 1863 aaKnown RBP3□□□□□ -1.93
VPS13D-207ENST00000476169 FLT4P35916 1363 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 ARHGEF28Q8N1W1 1705 aaKnown RBP2.99□□□□□ -1.93
VPS13D-207ENST00000476169 ACOX3O15254 700 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 CCDC22O60826 627 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 DCTN3O75935 186 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 IGLV2-23P01705 113 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 CD74P04233 296 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 ZBTB25P24278 435 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 PRSS3P35030 304 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 POLR2IP36954 125 aaKnown RBP2.99□□□□□ -1.93
VPS13D-207ENST00000476169 CBX5P45973 191 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 SLCO1A2P46721 670 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 OMPP47874 163 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 PNOCQ13519 176 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 ATP6AP1LQ52LC2 224 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 AKIRIN2Q53H80 203 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 TCTEX1D4Q5JR98 221 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 TMEM255AQ5JRV8 349 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 KCTD16Q68DU8 428 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 C6orf120Q7Z4R8 191 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 DRAM1Q8N682 238 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 ZNF645Q8N7E2 425 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 OR4M1Q8NGD0 313 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 OR5B17Q8NGF7 314 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 OR52E4Q8NGH9 312 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 OR6K3Q8NGY3 331 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 OR52P1PQ8NH57 321 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 ZNF420Q8TAQ5 688 aaPredicted RBP2.99□□□□□ -1.93
VPS13D-207ENST00000476169 CASTOR1Q8WTX7 329 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 ANKRD9Q96BM1 317 aaPredicted RBP2.99□□□□□ -1.93
VPS13D-207ENST00000476169 PPCDCQ96CD2 204 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 ANAPC13Q9BS18 74 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 BCL2L14Q9BZR8 327 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 SLC22A4Q9H015 551 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 OR51E2Q9H255 320 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 POMKQ9H5K3 350 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 OVOS2A0A0G2JMS6 1433 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 TNS2Q63HR2 1409 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 RTL1A6NKG5 1358 aa2.99□□□□□ -1.93
VPS13D-207ENST00000476169 KIF1AQ12756 1690 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 TOPAZ1Q8N9V7 1692 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 NRCAMQ92823 1304 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 IGHV6-1A0A0B4J1U7 121 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 LOC389332A0A1B0GUA5 103 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 KRBOX1C9JBD0 128 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 LAD1O00515 517 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 TAAR5O14804 337 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 GAS8-AS1O95177 125 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 MT-ND4P03905 459 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 TCRBP04435 133 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 IGHV4-34P06331 123 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 OMGP23515 440 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 GATA2P23769 480 aaPredicted RBP2.98□□□□□ -1.93
VPS13D-207ENST00000476169 RPL12P30050 165 aaKnown RBP2.98□□□□□ -1.93
VPS13D-207ENST00000476169 RIPPLY3P57055 190 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 CXCR4P61073 352 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 LYZP61626 148 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 B2MP61769 119 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 LSM6P62312 80 aaKnown RBP2.98□□□□□ -1.93
VPS13D-207ENST00000476169 RAP1AP62834 184 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 FAM3AP98173 230 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 RSPO1Q2MKA7 263 aaPredicted RBP2.98□□□□□ -1.93
VPS13D-207ENST00000476169 TMEM176BQ3YBM2 270 aaPredicted RBP2.98□□□□□ -1.93
VPS13D-207ENST00000476169 MPV17L2Q567V2 206 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 TTMPQ5BVD1 217 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 UBE2NLQ5JXB2 153 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 ZNF544Q6NX49 715 aa2.98□□□□□ -1.93
VPS13D-207ENST00000476169 RASSF6Q6ZTQ3 369 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms