RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 FBXW9Q5XUX1 488 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 NAT6Q93015 286 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 LPAR2Q9HBW0 351 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 DKKL1Q9UK85 242 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 V9GYS6 101 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 TNRC6BQ9UPQ9 1833 aaKnown RBP11.26□□□□□ -0.61
CCNL1-216ENST00000475298 F5H5K5 113 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 RAD51DO75771 328 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 SCGB1D2O95969 90 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 RPL29P47914 159 aaKnown RBP11.26□□□□□ -0.61
CCNL1-216ENST00000475298 HLA-DRB3P79483 266 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 ZNF468Q5VIY5 522 aaPredicted RBP11.26□□□□□ -0.61
CCNL1-216ENST00000475298 SLC25A26Q70HW3 274 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 SGPP2Q8IWX5 399 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 FNDC9Q8TBE3 224 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 MRPL24Q96A35 216 aaKnown RBP11.26□□□□□ -0.61
CCNL1-216ENST00000475298 LYZL4Q96KX0 146 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 GPER1Q99527 375 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 MOB1AQ9H8S9 216 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 C1orf123Q9NWV4 160 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 KIAA1456Q9P272 454 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 VAX2Q9UIW0 290 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 POLR3KQ9Y2Y1 108 aaPredicted RBP11.26□□□□□ -0.61
CCNL1-216ENST00000475298 WSB1Q9Y6I7 421 aa11.26□□□□□ -0.61
CCNL1-216ENST00000475298 E5RGE8 158 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 SDCBPO00560 298 aaPredicted RBP11.25□□□□□ -0.61
CCNL1-216ENST00000475298 HSPB1P04792 205 aaKnown RBP11.25□□□□□ -0.61
CCNL1-216ENST00000475298 IRF2P14316 349 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 SELEP16581 610 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 TMEM50BP56557 158 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 P2RY6Q15077 328 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 C1QL2Q7Z5L3 287 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 NEK7Q8TDX7 302 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 ZNF837Q96EG3 531 aaPredicted RBP11.25□□□□□ -0.61
CCNL1-216ENST00000475298 IMMP1LQ96LU5 166 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 SCGB3A2Q96PL1 93 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 HIST1H2AAQ96QV6 131 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 TMEM242Q9NWH2 141 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 NSG2Q9Y328 171 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 LOC102723996A0A087X1L8 192 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 XKRY2A2RUG3 117 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 B4DEV8 164 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 CLDN34H7C241 214 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 IFNL4K9M1U5 179 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 GPR137BO60478 399 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 CRTAPO75718 401 aaPredicted RBP11.25□□□□□ -0.61
CCNL1-216ENST00000475298 KNG1P01042 644 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 DBHP09172 617 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 BRS3P32247 399 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 CSNK1A1P48729 337 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 PDLIM4P50479 330 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 ZFP36L1Q07352 338 aaKnown RBP11.25□□□□□ -0.61
CCNL1-216ENST00000475298 ZNF506Q5JVG8 444 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 SNIP1Q8TAD8 396 aaKnown RBP11.25□□□□□ -0.61
CCNL1-216ENST00000475298 RNASE8Q8TDE3 154 aaKnown RBP11.25□□□□□ -0.61
CCNL1-216ENST00000475298 NUDT16L1Q9BRJ7 211 aaKnown RBP11.25□□□□□ -0.61
CCNL1-216ENST00000475298 WDR54Q9H977 334 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 ZNF160Q9HCG1 818 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 HSF4Q9ULV5 492 aa11.25□□□□□ -0.61
CCNL1-216ENST00000475298 ZDBF2Q9HCK1 2354 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 A0A1B0GU03 582 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 ZIC3O60481 467 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 KCNMB1Q16558 191 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 IQCJQ1A5X6 159 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 ZNF880Q6PDB4 577 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 SLC16A14Q7RTX9 510 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 GALNTL5Q7Z4T8 443 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 OR8G5Q8NG78 346 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 OR5H2Q8NGV7 314 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 PGAM5Q96HS1 289 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 ARHGAP5-AS1Q96IT6 56 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 TMEM59Q9BXS4 323 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 TNFSF11O14788 317 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 XRCC2O43543 280 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 CST2P09228 141 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 LIFP15018 202 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 PRSS12P56730 875 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 ENDOGQ14249 297 aaKnown RBP11.24□□□□□ -0.61
CCNL1-216ENST00000475298 IL11RAQ14626 422 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 CRIP3Q6Q6R5 217 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 DOK3Q7L591 496 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 OR10A7Q8NGE5 316 aa11.24□□□□□ -0.61
CCNL1-216ENST00000475298 URM1Q9BTM9 101 aaKnown RBP11.24□□□□□ -0.61
CCNL1-216ENST00000475298 RBM24Q9BX46 236 aaKnown RBP11.24□□□□□ -0.61
CCNL1-216ENST00000475298 A0A0G2JMM0 328 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 A0A1W2PPB8 328 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 A0A1W2PRS3 328 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 KIR3DP1A8MWS1 328 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 TCF21O43680 179 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 TLX3O43711 291 aaPredicted RBP11.23□□□□□ -0.61
CCNL1-216ENST00000475298 HIST1H1DP16402 221 aaKnown RBP11.23□□□□□ -0.61
CCNL1-216ENST00000475298 FAHP16930 419 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 MSR1P21757 451 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 CCL1P22362 96 aa11.23□□□□□ -0.61
CCNL1-216ENST00000475298 RBMXP38159 391 aaKnown RBP11.23□□□□□ -0.61
CCNL1-216ENST00000475298 ELLP55199 621 aaPredicted RBP11.23□□□□□ -0.61
CCNL1-216ENST00000475298 RPS18P62269 152 aaKnown RBP11.23□□□□□ -0.61
CCNL1-216ENST00000475298 RSPO1Q2MKA7 263 aaPredicted RBP11.23□□□□□ -0.61
CCNL1-216ENST00000475298 MRPL52Q86TS9 123 aaKnown RBP11.23□□□□□ -0.61
CCNL1-216ENST00000475298 ZFP62Q8NB50 900 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms