RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 GK3PQ14409 553 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 HES1Q14469 280 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 HNF4GQ14541 408 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 KPNB1Q14974 876 aaKnown RBP4□□□□□ -1.77
SNRNP40-204ENST00000474025 PNLIPRP3Q17RR3 467 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 C17orf58Q2M2W7 97 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 SPIN3Q5JUX0 258 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 ASPHD1Q5U4P2 390 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 CDPF1Q6NVV7 123 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 ZNF322Q6U7Q0 402 aaPredicted RBP4□□□□□ -1.77
SNRNP40-204ENST00000474025 OR8H3Q8N146 312 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 FAM58AQ8N1B3 248 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 OR4D6Q8NGJ1 314 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 OR9G1Q8NH87 305 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 IL17DQ8TAD2 202 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 GIPC3Q8TF64 312 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 C4orf3Q8WVX3 66 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 BORCS8Q96FH0 119 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 KIRREL1Q96J84 757 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 CNN2Q99439 309 aaKnown RBP4□□□□□ -1.77
SNRNP40-204ENST00000474025 APOL4Q9BPW4 351 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 ARPC5LQ9BPX5 153 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 TM2D3Q9BRN9 247 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 ABCG5Q9H222 651 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 PPIL3Q9H2H8 161 aaKnown RBP4□□□□□ -1.77
SNRNP40-204ENST00000474025 EDA2RQ9HAV5 297 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 PLEKHA1Q9HB21 404 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 HMG20AQ9NP66 347 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 ACTR3BQ9P1U1 418 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 MRM2Q9UI43 246 aaKnown RBP4□□□□□ -1.77
SNRNP40-204ENST00000474025 AMMECR1Q9Y4X0 333 aaPredicted RBP4□□□□□ -1.77
SNRNP40-204ENST00000474025 SNX5Q9Y5X3 404 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 SIRT4Q9Y6E7 314 aaPredicted RBP4□□□□□ -1.77
SNRNP40-204ENST00000474025 KIAA1109Q2LD37 5005 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 IGKV1-9A0A0C4DH69 117 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 KBTBD11-OT1A0A1B0GTJ5 212 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 FUOMA2VDF0 154 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 ANKRD34BA5PLL1 514 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 RBMY1BA6NDE4 496 aaKnown RBP3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 RBMY1EA6NEQ0 496 aaKnown RBP3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 ZNF729A6NN14 1252 aaPredicted RBP3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 J3QR06 171 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 SH2D1BO14796 132 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 SYT7O43581 403 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 IGHV3-7P01780 117 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 IGHG4P01861 327 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 ELANEP08246 267 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 RBMY1DP0C7P1 496 aaKnown RBP3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 CGB3P0DN86 165 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 CGB7P0DN87 165 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 OSMP13725 252 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 NFYBP25208 207 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 PSMB8P28062 276 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 POU3F4P49335 361 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 VEGFCP49767 419 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 RBP2P50120 134 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 RAB7AP51149 207 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 SUMO1P63165 101 aaKnown RBP3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 EBI3Q14213 229 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 ODF4Q2M2E3 257 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 SPATS1Q496A3 300 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 KRBOX4Q5JUW0 171 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 FAM27D1Q5T7N8 215 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 TMEM236Q5W0B7 351 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 C16orf89Q6UX73 402 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 TMEM179BQ7Z7N9 219 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 CATSPERDQ86XM0 798 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 TGIF2LXQ8IUE1 241 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 IZUMO1Q8IYV9 350 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 HS3ST5Q8IZT8 346 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 Q8N6K4 173 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 Q8N9W7 124 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 DNAAF1Q8NEP3 725 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 OR11H1Q8NG94 326 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 MYOZ3Q8TDC0 251 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 FBLIM1Q8WUP2 373 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 DDB2Q92466 427 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 LEAP2Q969E1 77 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 ISOC1Q96CN7 298 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 HRASLS5Q96KN8 279 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 GON7Q9BXV9 100 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 COMMD4Q9H0A8 199 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 LINC00574Q9H8X3 128 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 SLC25A19Q9HC21 320 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 EXOSC4Q9NPD3 245 aaKnown RBP3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 ISYNA1Q9NPH2 558 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 LIN7CQ9NUP9 197 aaKnown RBP3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 OR6C3Q9NZP0 311 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 PSG11Q9UQ72 335 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 GSTK1Q9Y2Q3 226 aa3.99□□□□□ -1.77
SNRNP40-204ENST00000474025 IGHV3-72A0A0B4J1Y9 119 aa3.98□□□□□ -1.77
SNRNP40-204ENST00000474025 IGHV1-3A0A0C4DH29 117 aa3.98□□□□□ -1.77
SNRNP40-204ENST00000474025 IGKV1-12A0A0C4DH73 117 aa3.98□□□□□ -1.77
SNRNP40-204ENST00000474025 LOC107986453A0A1B0GWG9 222 aa3.98□□□□□ -1.77
SNRNP40-204ENST00000474025 TRIM64CA6NLI5 447 aa3.98□□□□□ -1.77
SNRNP40-204ENST00000474025 NCBP2LA6PVI3 153 aaKnown RBP3.98□□□□□ -1.77
SNRNP40-204ENST00000474025 I3L521 148 aa3.98□□□□□ -1.77
SNRNP40-204ENST00000474025 M0R129 80 aa3.98□□□□□ -1.77
SNRNP40-204ENST00000474025 SLC33A1O00400 549 aaPredicted RBP3.98□□□□□ -1.77
SNRNP40-204ENST00000474025 RRP9O43818 475 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms