RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 VAMP5O95183 116 aa11.19□□□□□ -0.62
PDZRN3-205ENST00000466780 VAMP2P63027 116 aa11.19□□□□□ -0.62
PDZRN3-205ENST00000466780 COL19A1Q14993 1142 aa11.19□□□□□ -0.62
PDZRN3-205ENST00000466780 CALHM1Q8IU99 346 aa11.19□□□□□ -0.62
PDZRN3-205ENST00000466780 HIST3H2BBQ8N257 126 aa11.19□□□□□ -0.62
PDZRN3-205ENST00000466780 NAT6Q93015 286 aa11.19□□□□□ -0.62
PDZRN3-205ENST00000466780 NIPSNAP3BQ9BS92 247 aa11.19□□□□□ -0.62
PDZRN3-205ENST00000466780 SRXN1Q9BYN0 137 aa11.19□□□□□ -0.62
PDZRN3-205ENST00000466780 SIRT7Q9NRC8 400 aa11.19□□□□□ -0.62
PDZRN3-205ENST00000466780 A0A0J9YW62 118 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 G3V3Y1 287 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 FUT3P21217 361 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 NPBWR2P48146 333 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 ID3Q02535 119 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 ZNF154Q13106 437 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 PDZD11Q5EBL8 140 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 NMSQ5H8A3 153 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 ZNF818PQ6ZRF7 136 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 P4HA3Q7Z4N8 544 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 FAM185AQ8N0U4 392 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 INTS12Q96CB8 462 aaKnown RBP11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 GNPNAT1Q96EK6 184 aaPredicted RBP11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 SPIN2AQ99865 258 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 SPIN2BQ9BPZ2 258 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 PROK2Q9HC23 129 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 MRPS17Q9Y2R5 130 aaKnown RBP11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 PTRH2Q9Y3E5 179 aaKnown RBP11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 A0A087WZY1 265 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 hCG_38984A0A1B0GV85 526 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 OR6C6A6NF89 314 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 TP53I11O14683 189 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 TNFSF11O14788 317 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 OR7C1O76099 320 aaPredicted RBP11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 CEACAM1P13688 526 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 ZNF32P17041 273 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 ZNF92Q03936 586 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 KRTAP27-1Q3LI81 207 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 KHDC3LQ587J8 217 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 SPIN3Q5JUX0 258 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 SLC35E3Q7Z769 313 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 GPR137CQ8N3F9 429 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 ABHD5Q8WTS1 349 aa11.18□□□□□ -0.62
PDZRN3-205ENST00000466780 IGKV1D-13A0A0B4J2D9 117 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 CLEC18AA5D8T8 446 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 IGKV1-13P0DP09 117 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 CCL3P10147 92 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 HIST1H1BP16401 226 aaKnown RBP11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 FUT6P51993 359 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 PAX9P55771 341 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 RPL23AP62750 156 aaKnown RBP11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 DEFA6Q01524 100 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 AKR1C8PQ5T2L2 129 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 GAPTQ8N292 157 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 IL22RA1Q8N6P7 574 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 CLEC18CQ8NCF0 446 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 CPNE4Q96A23 557 aaPredicted RBP11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 ABHD14BQ96IU4 210 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 RHOVQ96L33 236 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 HIPK2Q9H2X6 1198 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 ZNF587BE7ETH6 402 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 CHST1O43916 411 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 CST2P09228 141 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 LIFP15018 202 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 HLA-DRB3P79483 266 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 ZNF468Q5VIY5 522 aaPredicted RBP11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 PLCXD3Q63HM9 321 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 CMTM1Q8IZ96 169 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 FGFBP3Q8TAT2 258 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 PIGCQ92535 297 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 FRZBQ92765 325 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 RBMXL1Q96E39 390 aaKnown RBP11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 PCED1AQ9H1Q7 454 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 CRLF2Q9HC73 371 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 TMEM38BQ9NVV0 291 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 WNT16Q9UBV4 365 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 KIAA1549Q9HCM3 1950 aa11.17□□□□□ -0.62
PDZRN3-205ENST00000466780 LOC102723971A0A1B0GUV8 181 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 PPP1R2P9O14990 202 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 F10P00742 488 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 TRGC1P0CF51 173 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 B4GALT1P15291 398 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 PSG4Q00888 419 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 BAXQ07812 192 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 DKKL1Q9UK85 242 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 RARRES3Q9UL19 164 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 RNF115Q9Y4L5 304 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 SLC22A20A6NK97 555 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 TOX3O15405 576 aaPredicted RBP11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 SCTP09683 121 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 UCP1P25874 307 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 TAS2R30P59541 319 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 TLE4Q04727 773 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 HERPUD1Q15011 391 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 TRIM61Q5EBN2 209 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 FAM90A2PQ658T7 463 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 OR2T2Q6IF00 324 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 SLC25A26Q70HW3 274 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 ZNF611Q8N823 705 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 OR13D1Q8NGV5 346 aa11.16□□□□□ -0.62
PDZRN3-205ENST00000466780 EXTL1Q92935 676 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms