RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 PNMA8CA0A1B0GUJ8 204 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 MEGF11A6BM72 1044 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 MAGEA13PA6NCF6 341 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 A6NDX4 124 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 ZNF729A6NN14 1252 aaPredicted RBP8.2□□□□□ -1.1
SF3A3-204ENST00000462258 CDRT1O95170 752 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 HTR3BO95264 441 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 JUNBP17275 347 aaPredicted RBP8.2□□□□□ -1.1
SF3A3-204ENST00000462258 IGFBP3P17936 291 aaPredicted RBP8.2□□□□□ -1.1
SF3A3-204ENST00000462258 FSTP19883 344 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 HTR1DP28221 377 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 ZNF93P35789 620 aaPredicted RBP8.2□□□□□ -1.1
SF3A3-204ENST00000462258 GDNFP39905 211 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 KIR2DS4P43632 304 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 RAB13P51153 203 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 DYNLT3P51808 116 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 C2orf68Q2NKX9 166 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 LAIR2Q6ISS4 152 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 C11orf88Q6PI97 169 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 RTN4RL2Q86UN3 420 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 STX19Q8N4C7 294 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 KLHDC1Q8N7A1 406 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 OR4D6Q8NGJ1 314 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 ZNF596Q8TC21 504 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 FBLIM1Q8WUP2 373 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 OR14A2Q96R54 314 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 S100A13Q99584 98 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 CDCA4Q9BXL8 241 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 METTL9Q9H1A3 318 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 ZNF286AQ9HBT8 521 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 IL36GQ9NZH8 169 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 PSORS1C1Q9UIG5 152 aa8.2□□□□□ -1.1
SF3A3-204ENST00000462258 MEIKINA0A087WXM9 373 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 OR7C1O76099 320 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-204ENST00000462258 TSPAN15O95858 294 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 CSTBP04080 98 aaKnown RBP8.19□□□□□ -1.1
SF3A3-204ENST00000462258 SERPINA2P20848 420 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 CD34P28906 385 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 C21orf33P30042 268 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-204ENST00000462258 KCNJ3P48549 501 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 WNT4P56705 351 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 RBM11P57052 281 aaKnown RBP8.19□□□□□ -1.1
SF3A3-204ENST00000462258 RPS11P62280 158 aaKnown RBP eCLIP8.19□□□□□ -1.1
SF3A3-204ENST00000462258 BDH1Q02338 343 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 HERPUD1Q15011 391 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 C17orf58Q2M2W7 97 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 NHLRC3Q5JS37 347 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 RSBN1Q5VWQ0 802 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-204ENST00000462258 CCBE1Q6UXH8 406 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-204ENST00000462258 ASCL4Q6XD76 172 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 Q6ZTK2 550 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 LINC00596Q86U02 117 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 ABHD12Q8N2K0 398 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 OSR2Q8N2R0 312 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 DTX3Q8N9I9 347 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 Q8NFD4 153 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 BPIFB6Q8NFQ5 453 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 OR13A1Q8NGR1 328 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 PLPPR1Q8TBJ4 325 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 KIRREL1Q96J84 757 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 ZNF184Q99676 751 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-204ENST00000462258 DCLRE1BQ9H816 532 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 ZNF702PQ9H963 129 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 PLCXD1Q9NUJ7 323 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 PAK1IP1Q9NWT1 392 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-204ENST00000462258 CALYQ9NYX4 217 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 ZNF581Q9P0T4 197 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 KIF25Q9UIL4 384 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 ST3GAL6Q9Y274 331 aa8.19□□□□□ -1.1
SF3A3-204ENST00000462258 TRAV8-7A0A075B6U6 113 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 A0A087X0M5 115 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 TRBV5-7A0A0A0MS05 114 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 KBTBD11-OT1A0A1B0GTJ5 212 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 A0A1B0GX30 115 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 A0A1W2PP11 408 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 TOR1AO14656 332 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 GEMIN2O14893 280 aaKnown RBP8.18□□□□□ -1.1
SF3A3-204ENST00000462258 ZNF780AO75290 641 aaPredicted RBP8.18□□□□□ -1.1
SF3A3-204ENST00000462258 IL1AP01583 271 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 IGLV1-47P01700 117 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 CELP19835 753 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 NFYBP25208 207 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 SSTR5P35346 364 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 ARHGDIBP52566 201 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 PAX5Q02548 391 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 DOC2BQ14184 412 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 RBM39Q14498 530 aaKnown RBP8.18□□□□□ -1.1
SF3A3-204ENST00000462258 HABP2Q14520 560 aaPredicted RBP8.18□□□□□ -1.1
SF3A3-204ENST00000462258 HLA-DRB5Q30154 266 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 JAGN1Q8N5M9 183 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 C11orf44Q8N8P7 122 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 SUMF2Q8NBJ7 301 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 MRGPRDQ8TDS7 321 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 TFAP2CQ92754 450 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 DERL3Q96Q80 235 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 DPCDQ9BVM2 203 aaPredicted RBP8.18□□□□□ -1.1
SF3A3-204ENST00000462258 BARHL1Q9BZE3 327 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 IFT22Q9H7X7 185 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 FKBP14Q9NWM8 211 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 DPM3Q9P2X0 92 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms