RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 SPNS3Q6ZMD2 512 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 Q6ZTK2 550 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 BTN2A1Q7KYR7 527 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 IZUMO1Q8IYV9 350 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 FAM185AQ8N0U4 392 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 TPRX1Q8N7U7 411 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 DTX3Q8N9I9 347 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 OR4M1Q8NGD0 313 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 PLPPR1Q8TBJ4 325 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 S100A16Q96FQ6 103 aaKnown RBP8.43□□□□□ -1.06
UPF2-204ENST00000460569 COQ2Q96H96 371 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 COX4I2Q96KJ9 171 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 CMTM3Q96MX0 182 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 SULT4A1Q9BR01 284 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 FAAP24Q9BTP7 215 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 NXF2Q9GZY0 626 aaKnown RBP8.43□□□□□ -1.06
UPF2-204ENST00000460569 DIABLOQ9NR28 239 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 ETAA1Q9NY74 926 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 HSF4Q9ULV5 492 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 MALRD1Q5VYJ5 2156 aa8.43□□□□□ -1.06
UPF2-204ENST00000460569 ARHGAP32A7KAX9 2087 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.42□□□□□ -1.06
UPF2-204ENST00000460569 TRAV18A0A075B6X5 111 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 LOC105371242A0A075B767 164 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 TRBV23-1A0A0A0MS06 115 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 A0A0A6YYH2 397 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 TMEM30CPA0ZSE6 113 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 FUOMA2VDF0 154 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 A6NJ64 397 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 B4DSR2 109 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 MFNGO00587 321 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 ECDO95905 644 aaPredicted RBP8.42□□□□□ -1.06
UPF2-204ENST00000460569 GLAP06280 429 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 MSMBP08118 114 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 HIST1H1DP16402 221 aaKnown RBP8.42□□□□□ -1.06
UPF2-204ENST00000460569 GNB3P16520 340 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 ZNF16P17020 682 aaPredicted RBP8.42□□□□□ -1.06
UPF2-204ENST00000460569 GLIPR1P48060 266 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 RPL31P62899 125 aaKnown RBP8.42□□□□□ -1.06
UPF2-204ENST00000460569 MADCAM1Q13477 382 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 TMEM69Q5SWH9 247 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 RSBN1Q5VWQ0 802 aaPredicted RBP8.42□□□□□ -1.06
UPF2-204ENST00000460569 CD276Q5ZPR3 534 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 LINC01356Q8N9X3 169 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 MSI2Q96DH6 328 aaKnown RBP8.42□□□□□ -1.06
UPF2-204ENST00000460569 NUDT16L1Q9BRJ7 211 aaKnown RBP8.42□□□□□ -1.06
UPF2-204ENST00000460569 DCTN5Q9BTE1 182 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 MIXL1Q9H2W2 232 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 MMP27Q9H306 513 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 ZMAT3Q9HA38 289 aaKnown RBP8.42□□□□□ -1.06
UPF2-204ENST00000460569 CHMP1AQ9HD42 196 aaPredicted RBP8.42□□□□□ -1.06
UPF2-204ENST00000460569 C19orf12Q9NSK7 152 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 EXTL2Q9UBQ6 330 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 AK3Q9UIJ7 227 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 KIF25Q9UIL4 384 aa8.42□□□□□ -1.06
UPF2-204ENST00000460569 RPUSD1Q9UJJ7 312 aaKnown RBP8.42□□□□□ -1.06
UPF2-204ENST00000460569 OTOGQ6ZRI0 2925 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 MED13LQ71F56 2210 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 MEIKINA0A087WXM9 373 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 ODAMA1E959 279 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 MEX3AA1L020 520 aaKnown RBP8.41□□□□□ -1.06
UPF2-204ENST00000460569 TMEM235A6NFC5 223 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 XRCC3O43542 346 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 ENSAO43768 121 aaKnown RBP8.41□□□□□ -1.06
UPF2-204ENST00000460569 GSTP1P09211 210 aaKnown RBP8.41□□□□□ -1.06
UPF2-204ENST00000460569 CD3GP09693 182 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 ERP29P30040 261 aaKnown RBP8.41□□□□□ -1.06
UPF2-204ENST00000460569 S100A5P33763 92 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 TALDO1P37837 337 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 GLP1RP43220 463 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 TAS2R20P59543 309 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 MRPS15P82914 257 aaKnown RBP8.41□□□□□ -1.06
UPF2-204ENST00000460569 ARFRP1Q13795 201 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 ARL6IP1Q15041 203 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 CDNFQ49AH0 187 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 OLFML2AQ68BL7 652 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 SLC35E4Q6ICL7 350 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 CNIH2Q6PI25 160 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 ZNF497Q6ZNH5 498 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 TRAPPC6BQ86SZ2 158 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 C1orf159Q96HA4 380 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 C18orf12Q96KH6 178 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 CMSS1Q9BQ75 279 aaKnown RBP8.41□□□□□ -1.06
UPF2-204ENST00000460569 LPAR3Q9UBY5 353 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 A3GALT2U3KPV4 340 aa8.41□□□□□ -1.06
UPF2-204ENST00000460569 TRGV10A0A0A0MS01 117 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 TRAV20A0A0B4J274 112 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 PPIAL4CA0A0B4J2A2 164 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 IGHV2-70DA0A0C4DH43 119 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 hADV38S2A0JD32 116 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 SERPINE3A8MV23 424 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 CA11O75493 328 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 CLPXO76031 633 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 TGFAP01135 160 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 PPIAL4GP0DN37 164 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 MNDAP41218 407 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 GNG2P59768 71 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 PAX5Q02548 391 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 MEF2CQ06413 473 aaPredicted RBP8.4□□□□□ -1.06
UPF2-204ENST00000460569 ZNF273Q14593 569 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms