RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 IGHG1P01857 330 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 RBP1P09455 135 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 GKN3PP0CG01 181 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 PGA4P0DJD7 388 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 PGA3P0DJD8 388 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 T-ENOLP0DO92 83 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 PSKH1P11801 424 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 IFI30P13284 250 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 RPS4Y1P22090 263 aaKnown RBP3.59□□□□□ -1.83
SDCBP-205ENST00000447267 TUBG1P23258 451 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 LAP3P28838 519 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 PRDX6P30041 224 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 PAFAH1B1P43034 410 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 MAGEA4P43358 317 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 YAP1P46937 504 aaKnown RBP3.59□□□□□ -1.83
SDCBP-205ENST00000447267 MAGOHP61326 146 aaKnown RBP3.59□□□□□ -1.83
SDCBP-205ENST00000447267 ILF2Q12905 390 aaKnown RBP3.59□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF846Q147U1 533 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 SMCO1Q147U7 214 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 KIAA0040Q15053 153 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 SNAPC1Q16533 368 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 GPAT3Q53EU6 434 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 KLHL12Q53G59 568 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF678Q5SXM1 525 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 MRPL2Q5T653 305 aaKnown RBP3.59□□□□□ -1.83
SDCBP-205ENST00000447267 FAM69AQ5T7M9 428 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 PVRIGQ6DKI7 326 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 WBP2NLQ6ICG8 309 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 CCDC144NLQ6NUI1 221 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 FBXW12Q6X9E4 464 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF367Q7RTV3 350 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 DCXRQ7Z4W1 244 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 ANKRD46Q86W74 232 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 NUDCD3Q8IVD9 361 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF781Q8N8C0 355 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 OR13C3Q8NGS6 347 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 OR6X1Q8NH79 312 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 OR10J5Q8NHC4 309 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 NDNFQ8TB73 568 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 SFXN5Q8TD22 340 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 THRSPQ92748 146 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 MAGOHBQ96A72 148 aaKnown RBP3.59□□□□□ -1.83
SDCBP-205ENST00000447267 TLCD1Q96CP7 247 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 TRNT1Q96Q11 434 aaKnown RBP3.59□□□□□ -1.83
SDCBP-205ENST00000447267 KCNA7Q96RP8 456 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 ATP6V0BQ99437 205 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 METTL9Q9H1A3 318 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 WDR76Q9H967 626 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 TUBG2Q9NRH3 451 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 ADA2Q9NZK5 511 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 SLC25A10Q9UBX3 287 aaPredicted RBP3.59□□□□□ -1.83
SDCBP-205ENST00000447267 BTNL2Q9UIR0 455 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF229Q9UJW7 825 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF221Q9UK13 617 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 MGAT4AQ9UM21 535 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 AURKCQ9UQB9 309 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 NDUFAF1Q9Y375 327 aa3.59□□□□□ -1.83
SDCBP-205ENST00000447267 IGKV1D-43A0A0B4J1Z2 117 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 A0A1W2PN81 502 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 A0A1W2PPH5 198 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 IFITM10A6NMD0 228 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 CENPXA8MT69 81 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 LINC01619G3V211 115 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 H0Y980 276 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 ITGB1BP1O14713 200 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 IL1AP01583 271 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 FGGP02679 453 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 BGLAPP02818 100 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 ZNF823P16415 610 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 SDC1P18827 310 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 IMPDH1P20839 514 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 MATN1P21941 496 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 CHRNA7P36544 502 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 HPCAL1P37235 193 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 OMPP47874 163 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 ZNF133P52736 654 aaPredicted RBP3.58□□□□□ -1.84
SDCBP-205ENST00000447267 SLC25A1P53007 311 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 MRPS34P82930 218 aaKnown RBP3.58□□□□□ -1.84
SDCBP-205ENST00000447267 SF3A3Q12874 501 aaKnown RBP eCLIP3.58□□□□□ -1.84
SDCBP-205ENST00000447267 MADCAM1Q13477 382 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 MELKQ14680 651 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 SPA17Q15506 151 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 UAP1Q16222 522 aaPredicted RBP3.58□□□□□ -1.84
SDCBP-205ENST00000447267 HIST3H3Q16695 136 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 PCK2Q16822 640 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 MICBQ29980 383 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 FAM83EQ2M2I3 478 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 ZFP69Q49AA0 526 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 ELP2Q6IA86 826 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 ETFRF1Q6IPR1 90 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 C16orf62Q7Z3J2 963 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 PXKQ7Z7A4 578 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 FOXRED2Q8IWF2 684 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 UBE2DNLQ8IWF7 75 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 C6orf223Q8N319 242 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 ZNF491Q8N8L2 437 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 OR52L1Q8NGH7 329 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 ABHD5Q8WTS1 349 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 ACOT11Q8WXI4 607 aaPredicted RBP3.58□□□□□ -1.84
SDCBP-205ENST00000447267 SLC7A6Q92536 515 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms