RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 C12orf45Q8N5I9 185 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 TMEM105Q8N8V8 129 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZIC4Q8N9L1 334 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 ACBD4Q8NC06 268 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZBTB44Q8NCP5 570 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR8B12Q8NGG6 310 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR4D10Q8NGI6 311 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR52B4Q8NGK2 314 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR10R2Q8NGX6 335 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR2V1Q8NHB1 315 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 CT55Q8WUE5 264 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 SPTSSAQ969W0 71 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 FAM71F1Q96KD3 344 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 GPER1Q99527 375 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 S100A13Q99584 98 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 PRRT1Q99946 306 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 ATG101Q9BSB4 218 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 URM1Q9BTM9 101 aaKnown RBP2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 EDEM2Q9BV94 578 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 DDA1Q9BW61 102 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 ULBP2Q9BZM5 246 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 SELENOIQ9C0D9 397 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 CHST6Q9GZX3 395 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 HEXA-AS1Q9H8Q6 139 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 Q9H8V8 135 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 SDF2L1Q9HCN8 221 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 IFT46Q9NQC8 304 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 GPR84Q9NQS5 396 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 CA10Q9NS85 328 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 TAS2R3Q9NYW6 316 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF319Q9P2F9 582 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 GHRLQ9UBU3 117 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 KLK13Q9UKR3 277 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 ELF5Q9UKW6 265 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 PLEKHA6Q9Y2H5 1048 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 MRPS28Q9Y2Q9 187 aaKnown RBP2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 MRPS18CQ9Y3D5 142 aaKnown RBP2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 U3KQ87 197 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 V9GYS6 101 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 CEP350Q5VT06 3117 aa2.9□□□□□ -1.94
HMGB3P11-201ENST00000440127 CENPFP49454 3210 aa2.9□□□□□ -1.94
HMGB3P11-201ENST00000440127 A0A0U1RQV5 110 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 LINC00862A6NCI5 91 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 TMEM235A6NFC5 223 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 TUBAL3A6NHL2 446 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 RFPL4AA6NLU0 287 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF716A6NP11 495 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 MCRIP1C9JLW8 97 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 F5H5K5 113 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 RFPL4AL1F8VTS6 287 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 G3V3Q6 166 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 M0R135 149 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 M0R233 179 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 M0R296 226 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 GOSR2O14653 212 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 SGCEO43556 437 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 CXCL13O43927 109 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 SSX5O60225 188 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 GPR137BO60478 399 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 CRTAPO75718 401 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 DHRS3O75911 302 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 TOXO94900 526 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 SIX6O95475 246 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 IGLV3-1P01715 115 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 IFNA6P05013 189 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 CSN2P05814 226 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 FCER2P06734 321 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 CST2P09228 141 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 SP9P0CG40 484 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF35P13682 527 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 GNB3P16520 340 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF24P17028 368 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 CXCL2P19875 107 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 TBPP20226 339 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 NFYAP23511 347 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 CD34P28906 385 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 OTX1P32242 354 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 DLSTP36957 453 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 ALDH3B1P43353 468 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 CBX5P45973 191 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 IER3P46695 156 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR3A4PP47883 348 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR3A3P47888 321 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 CAMLGP49069 296 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 CYB561P49447 251 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 STARP49675 285 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 GMFBP60983 142 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 UBE2MP61081 183 aaKnown RBP2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 RAB14P61106 215 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 PCBD1P61457 104 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 RPS18P62269 152 aaKnown RBP2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 RPS27AP62979 156 aaKnown RBP2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 OC90Q02509 493 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 FGL1Q08830 312 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 SCRN3Q0VDG4 424 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 ARL6IP1Q15041 203 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 RAB35Q15286 201 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 GRK1Q15835 563 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 SCGB2B2Q4G0G5 96 aa2.9□□□□□ -1.95
HMGB3P11-201ENST00000440127 ACTBL2Q562R1 376 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms