RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 TMBIM6P55061 237 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 DSCR4P56555 118 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 RAP1BP61224 184 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 CRADDP78560 199 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 RPL19P84098 196 aaKnown RBP3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 CDKL1Q00532 357 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 MZT1Q08AG7 82 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 MAB21L1Q13394 359 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 SLC17A1Q14916 467 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 SPA17Q15506 151 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 OR4D1Q15615 310 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 OR8G1Q15617 311 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 MAPK11Q15759 364 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 VPS26BQ4G0F5 336 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 IFI44LQ53G44 452 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 PABPC1L2AQ5JQF8 200 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 ZNF506Q5JVG8 444 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 CLLU1Q5K131 121 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 ANKRD22Q5VYY1 191 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 NCR3LG1Q68D85 454 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 REP15Q6BDI9 236 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 ACSM5Q6NUN0 579 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 HAGHLQ6PII5 290 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 MBOAT1Q6ZNC8 495 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 SLC35D2Q76EJ3 337 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 SSX7Q7RTT5 188 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 COX8CQ7Z4L0 72 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 SKA3Q8IX90 412 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 RDH10Q8IZV5 341 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 C8orf59Q8N0T1 100 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 MTURNQ8N3F0 131 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 C11orf42Q8N5U0 333 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 TEX29Q8N6K0 151 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 PACRGLQ8N7B6 248 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 ACOT4Q8N9L9 421 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 OR6M1Q8NGM8 313 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 RDH11Q8TC12 318 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 ZNF418Q8TF45 676 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 RAB2BQ8WUD1 216 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 UBE2E3Q969T4 207 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 TLCD1Q96CP7 247 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 RAB3CQ96E17 227 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 CPNE2Q96FN4 548 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 Q96MT0 163 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 OR5B2Q96R09 309 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 ZNF607Q96SK3 696 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 PHB2Q99623 299 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 DOK1Q99704 481 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 HOPXQ9BPY8 73 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 SLC35A5Q9BS91 424 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 CACNG6Q9BXT2 260 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 AICDAQ9GZX7 198 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 MIXL1Q9H2W2 232 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 WDR55Q9H6Y2 383 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 RHOFQ9HBH0 211 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 FBXO6Q9NRD1 293 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 LYARQ9NX58 379 aaKnown RBP3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 RDH8Q9NYR8 311 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 USE1Q9NZ43 259 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 TMEM216Q9P0N5 145 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 ARMCX1Q9P291 453 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 SLC17A7Q9P2U7 560 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 CHRNA9Q9UGM1 479 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 PHF11Q9UIL8 331 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 SNX12Q9UMY4 172 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 FLVCR2Q9UPI3 526 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 MOKQ9UQ07 419 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 NSG2Q9Y328 171 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 RHBDD3Q9Y3P4 386 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 U3KQV3 271 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 TRAV18A0A075B6X5 111 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 FABP12A6NFH5 140 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 SDR42E2A6NKP2 422 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 C4orf51C9J302 202 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 H7C417 338 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 ARPC3O15145 178 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 ZNF208O43345 1280 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 PRAF2O60831 178 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 UGT2B11O75310 529 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 SCELO95171 688 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 VENTXO95231 258 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 AIFM1O95831 613 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 SERPINA1P01009 418 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 FGGP02679 453 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 RRASP10301 218 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 UROSP10746 265 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 AREGP15514 252 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 ZNF250P15622 560 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 GSTM3P21266 225 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 STOMP27105 288 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 S100A11P31949 105 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 CD80P33681 288 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 SOAT1P35610 550 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 RBM34P42696 430 aaKnown RBP3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 SSR2P43308 183 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 MAGEA12P43365 314 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 EFNA4P52798 201 aa3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 FGF8P55075 233 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 MRPS11P82912 194 aaKnown RBP3.51□□□□□ -1.85
HMGB3P5-201ENST00000428894 PITPNAQ00169 270 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms