RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 SLITRK2Q9H156 845 aa16.46■□□□□ 0.23
GTF3A-202ENST00000419181 PPIL3Q9H2H8 161 aaKnown RBP16.46■□□□□ 0.23
GTF3A-202ENST00000419181 IFT22Q9H7X7 185 aa16.46■□□□□ 0.23
GTF3A-202ENST00000419181 ING3Q9NXR8 418 aa16.46■□□□□ 0.23
GTF3A-202ENST00000419181 ST3GAL6Q9Y274 331 aa16.46■□□□□ 0.23
GTF3A-202ENST00000419181 CLPSL1A2RUU4 121 aa16.45■□□□□ 0.22
GTF3A-202ENST00000419181 VGLL3A8MV65 326 aa16.45■□□□□ 0.22
GTF3A-202ENST00000419181 ZNF780AO75290 641 aaPredicted RBP16.45■□□□□ 0.22
GTF3A-202ENST00000419181 CSTBP04080 98 aaKnown RBP16.45■□□□□ 0.22
GTF3A-202ENST00000419181 SERPINA2P20848 420 aa16.45■□□□□ 0.22
GTF3A-202ENST00000419181 PAX5Q02548 391 aa16.45■□□□□ 0.22
GTF3A-202ENST00000419181 PRAMEF5Q5TYX0 476 aa16.45■□□□□ 0.22
GTF3A-202ENST00000419181 OLFML2AQ68BL7 652 aa16.45■□□□□ 0.22
GTF3A-202ENST00000419181 DHRS7BQ6IAN0 325 aaPredicted RBP16.45■□□□□ 0.22
GTF3A-202ENST00000419181 LYPD6Q86Y78 171 aa16.45■□□□□ 0.22
GTF3A-202ENST00000419181 CDH26Q8IXH8 852 aa16.45■□□□□ 0.22
GTF3A-202ENST00000419181 FOXRED1Q96CU9 486 aaPredicted RBP16.45■□□□□ 0.22
GTF3A-202ENST00000419181 MALSU1Q96EH3 234 aa16.45■□□□□ 0.22
GTF3A-202ENST00000419181 ZNF581Q9P0T4 197 aa16.45■□□□□ 0.22
GTF3A-202ENST00000419181 MAS1P04201 325 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 CRHBPP24387 322 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 CDK2P24941 298 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 DYNC1I2Q13409 638 aaKnown RBP16.44■□□□□ 0.22
GTF3A-202ENST00000419181 INSL4Q14641 139 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 MED22Q15528 200 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 SLC22A6Q4U2R8 563 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 Q6ZSV7 163 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 LINC00596Q86U02 117 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 JAGN1Q8N5M9 183 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 MS4A15Q8N5U1 240 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 LINC01006Q8NI28 216 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 PIFOQ8TCI5 191 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 WFDC12Q8WWY7 111 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 MUL1Q969V5 352 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 CLEC7AQ9BXN2 247 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 NCOR1P1Q9H4R4 102 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 OR6C3Q9NZP0 311 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 KIF25Q9UIL4 384 aa16.44■□□□□ 0.22
GTF3A-202ENST00000419181 A0A1W2PP11 408 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 ZNF729A6NN14 1252 aaPredicted RBP16.43■□□□□ 0.22
GTF3A-202ENST00000419181 GEMIN2O14893 280 aaKnown RBP16.43■□□□□ 0.22
GTF3A-202ENST00000419181 RGS10O43665 173 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 ATP6V1G2O95670 118 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 CGB3P0DN86 165 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 CGB7P0DN87 165 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 GTF2F2P13984 249 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 GDNFP39905 211 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 KCNJ3P48549 501 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 GPR50Q13585 617 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 C17orf58Q2M2W7 97 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 MINOS1Q5TGZ0 78 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 RSBN1Q5VWQ0 802 aaPredicted RBP16.43■□□□□ 0.22
GTF3A-202ENST00000419181 OR52W1Q6IF63 320 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 UNQ9370/PRO34162Q6UXP9 181 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 BAIAP2L2Q6UXY1 529 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 NKAIN3Q8N8D7 197 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 SUMF2Q8NBJ7 301 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 PLPPR1Q8TBJ4 325 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 DPCDQ9BVM2 203 aaPredicted RBP16.43■□□□□ 0.22
GTF3A-202ENST00000419181 BARHL1Q9BZE3 327 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 C16orf95Q9H693 158 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 PCDHB16Q9NRJ7 776 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 MRPS28Q9Y2Q9 187 aaKnown RBP16.43■□□□□ 0.22
GTF3A-202ENST00000419181 MINOS1-NBL1R4GNA1 71 aa16.43■□□□□ 0.22
GTF3A-202ENST00000419181 MGAM2Q2M2H8 2515 aa16.42■□□□□ 0.22
GTF3A-202ENST00000419181 MEIKINA0A087WXM9 373 aa16.42■□□□□ 0.22
GTF3A-202ENST00000419181 SC5DO75845 299 aa16.42■□□□□ 0.22
GTF3A-202ENST00000419181 TSPAN9O75954 239 aa16.42■□□□□ 0.22
GTF3A-202ENST00000419181 OR7C1O76099 320 aaPredicted RBP16.42■□□□□ 0.22
GTF3A-202ENST00000419181 GP2P55259 537 aaKnown RBP16.42■□□□□ 0.22
GTF3A-202ENST00000419181 GPR176Q14439 515 aa16.42■□□□□ 0.22
GTF3A-202ENST00000419181 SSX2Q16385 188 aa16.42■□□□□ 0.22
GTF3A-202ENST00000419181 LY6EQ16553 131 aa16.42■□□□□ 0.22
GTF3A-202ENST00000419181 MPV17LQ2QL34 196 aa16.42■□□□□ 0.22
GTF3A-202ENST00000419181 ACSM3Q53FZ2 586 aa16.42■□□□□ 0.22
GTF3A-202ENST00000419181 GLIPR1L1Q6UWM5 242 aa16.42■□□□□ 0.22
GTF3A-202ENST00000419181 ABHD12Q8N2K0 398 aa16.42■□□□□ 0.22
GTF3A-202ENST00000419181 OR4D6Q8NGJ1 314 aa16.42■□□□□ 0.22
GTF3A-202ENST00000419181 OR4P4Q8NGL7 312 aa16.42■□□□□ 0.22
GTF3A-202ENST00000419181 TMED9Q9BVK6 235 aa16.42■□□□□ 0.22
GTF3A-202ENST00000419181 KBTBD11-OT1A0A1B0GTJ5 212 aa16.41■□□□□ 0.22
GTF3A-202ENST00000419181 CD34P28906 385 aa16.41■□□□□ 0.22
GTF3A-202ENST00000419181 GLP1RP43220 463 aa16.41■□□□□ 0.22
GTF3A-202ENST00000419181 FAM27D1Q5T7N8 215 aa16.41■□□□□ 0.22
GTF3A-202ENST00000419181 PRSS48Q7RTY5 328 aa16.41■□□□□ 0.22
GTF3A-202ENST00000419181 RTN4RL2Q86UN3 420 aa16.41■□□□□ 0.22
GTF3A-202ENST00000419181 ZNF565Q8N9K5 539 aa16.41■□□□□ 0.22
GTF3A-202ENST00000419181 OR13A1Q8NGR1 328 aa16.41■□□□□ 0.22
GTF3A-202ENST00000419181 MRPS24Q96EL2 167 aaKnown RBP16.41■□□□□ 0.22
GTF3A-202ENST00000419181 CNBD2Q96M20 576 aa16.41■□□□□ 0.22
GTF3A-202ENST00000419181 RAB26Q9ULW5 256 aa16.41■□□□□ 0.22
GTF3A-202ENST00000419181 RNF114Q9Y508 228 aa16.41■□□□□ 0.22
GTF3A-202ENST00000419181 PKD1L1Q8TDX9 2849 aa16.41■□□□□ 0.22
GTF3A-202ENST00000419181 A0A087X0M5 115 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 A0A1B0GX30 115 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 MEGF11A6BM72 1044 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 DYNLT3P51808 116 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 PROK1P58294 105 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 FAM189A2Q15884 450 aa16.4■□□□□ 0.22
GTF3A-202ENST00000419181 PLA1AQ53H76 456 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms