RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ACSM3Q53FZ2 586 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 DMRTC1Q5HYR2 192 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 KRBOX4Q5JUW0 171 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 C1orf100Q5SVJ3 147 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 DDI2Q5TDH0 399 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 OLFML2AQ68BL7 652 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 DUX4L9Q6RFH8 374 aaPredicted RBP5.21□□□□□ -1.58
USP54-202ENST00000413442 THNSL2Q86YJ6 484 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 OR4S1Q8NGB4 309 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 OR4M1Q8NGD0 313 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 OR52N4Q8NGI2 321 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 OR10AC1Q8NH08 325 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 TNFAIP8L1Q8WVP5 186 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 C1orf147Q96MC9 270 aaPredicted RBP5.21□□□□□ -1.58
USP54-202ENST00000413442 DERL3Q96Q80 235 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 ZNF184Q99676 751 aaPredicted RBP5.21□□□□□ -1.58
USP54-202ENST00000413442 SSX3Q99909 188 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 CLEC7AQ9BXN2 247 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 RIMS4Q9H426 269 aaPredicted RBP5.21□□□□□ -1.58
USP54-202ENST00000413442 TCF7L1Q9HCS4 588 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 SIRT7Q9NRC8 400 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 ABCB10Q9NRK6 738 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 DPM3Q9P2X0 92 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 DUX4Q9UBX2 424 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 NKX1-2Q9UD57 310 aaPredicted RBP5.21□□□□□ -1.58
USP54-202ENST00000413442 CLEC2DQ9UHP7 191 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 ING4Q9UNL4 249 aa5.21□□□□□ -1.58
USP54-202ENST00000413442 AMMECR1Q9Y4X0 333 aaPredicted RBP5.21□□□□□ -1.58
USP54-202ENST00000413442 ODAMA1E959 279 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 ODF3BA8MYP8 253 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 NPIPB11E5RHQ5 1161 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 M0QZK8 103 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 CCRL2O00421 344 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 ANGPTL7O43827 346 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 GPR137BO60478 399 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 SC5DO75845 299 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 HTR3BO95264 441 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 LALBAP00709 142 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 IGLV1-47P01700 117 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 SELLP14151 372 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 CPEP16870 476 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 FUT3P21217 361 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 RBMXP38159 391 aaKnown RBP5.2□□□□□ -1.58
USP54-202ENST00000413442 MNDAP41218 407 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 OR3A1P47881 315 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 SOX2P48431 317 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 RAG2P55895 527 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 RBM11P57052 281 aaKnown RBP5.2□□□□□ -1.58
USP54-202ENST00000413442 GABARAPL2P60520 117 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 HOXA4Q00056 320 aaPredicted RBP5.2□□□□□ -1.58
USP54-202ENST00000413442 SCN1BQ07699 218 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 ARL6IP1Q15041 203 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 MED22Q15528 200 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 PAN3Q58A45 887 aaKnown RBP5.2□□□□□ -1.58
USP54-202ENST00000413442 LY6G6FQ5SQ64 297 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 RUSC1-AS1Q66K80 236 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 XAF1Q6GPH4 301 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 ASPHD2Q6ICH7 369 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 LAIR2Q6ISS4 152 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 HCP5Q6MZN7 132 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 CRIP3Q6Q6R5 217 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 TRAPPC6BQ86SZ2 158 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 LYPD6Q86Y78 171 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 ABHD12Q8N2K0 398 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 SVOPQ8N4V2 548 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 OR9G1Q8NH87 305 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 KCNG3Q8TAE7 436 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 RGP1Q92546 391 aaPredicted RBP5.2□□□□□ -1.58
USP54-202ENST00000413442 FCGR1BQ92637 280 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 UFD1Q92890 307 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 CHIAQ9BZP6 476 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 NPFFR1Q9GZQ6 430 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 FAM192AQ9GZU8 254 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 ELL3Q9HB65 397 aaPredicted RBP5.2□□□□□ -1.58
USP54-202ENST00000413442 TAS2R4Q9NYW5 299 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 C1RLQ9NZP8 487 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 MGAT4AQ9UM21 535 aa5.2□□□□□ -1.58
USP54-202ENST00000413442 SIRT4Q9Y6E7 314 aaPredicted RBP5.2□□□□□ -1.58
USP54-202ENST00000413442 IGHV3OR16-10A0A075B7F0 116 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 MEIKINA0A087WXM9 373 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 IGHV2-26A0A0B4J1V2 119 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 TMEM30CPA0ZSE6 113 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 H3BSH0 61 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 SIRPB1O00241 398 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 PDCD5O14737 125 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 OR7C1O76099 320 aaPredicted RBP5.19□□□□□ -1.58
USP54-202ENST00000413442 ATP6V1G2O95670 118 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 IGHV4-59P01825 116 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 ARG1P05089 322 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 UCHL1P09936 223 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 FAM106CPP0CH98 169 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 CCL3L1P16619 93 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 DUSP1P28562 367 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 CEBPDP49716 269 aaPredicted RBP5.19□□□□□ -1.58
USP54-202ENST00000413442 RAB7AP51149 207 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 AQP4P55087 323 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 AESQ08117 197 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 HNRNPA0Q13151 305 aaKnown RBP5.19□□□□□ -1.58
USP54-202ENST00000413442 DYNC1I2Q13409 638 aaKnown RBP5.19□□□□□ -1.58
USP54-202ENST00000413442 EDDM3AQ14507 147 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms