RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 PECRQ9BY49 303 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 TBL1XR1Q9BZK7 514 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 ULBP1Q9BZM6 244 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 OR51I1Q9H343 314 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 RPP21Q9H633 154 aaKnown RBP3.42□□□□□ -1.86
LSM5-205ENST00000409952 MRPL40Q9NQ50 206 aaKnown RBP3.42□□□□□ -1.86
LSM5-205ENST00000409952 UBQLN4Q9NRR5 601 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 PAK5Q9P286 719 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 GLS2Q9UI32 602 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 DKKL1Q9UK85 242 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 CSAG2Q9Y5P2 127 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 ARL5AQ9Y689 179 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 MTCL1Q9Y4B5 1905 aaKnown RBP3.42□□□□□ -1.86
LSM5-205ENST00000409952 HCFC1P51610 2035 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 IGHV2-26A0A0B4J1V2 119 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 IGHV5-10-1A0A0J9YXX1 117 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 SMIM9A6NGZ8 99 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 OR5K4A6NMS3 321 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 BCL2L11O43521 198 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 CHST10O43529 356 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 GCM2O75603 506 aaPredicted RBP3.41□□□□□ -1.86
LSM5-205ENST00000409952 IGHV3-11P01762 117 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 SNRPAP09012 282 aaKnown RBP3.41□□□□□ -1.86
LSM5-205ENST00000409952 ZNF883P0CG24 379 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 IGHV1-8P0DP01 117 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 SLC35A2P78381 396 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 SKP2Q13309 424 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 IHHQ14623 411 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 SSX1Q16384 188 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 SNRNP35Q16560 246 aaKnown RBP3.41□□□□□ -1.86
LSM5-205ENST00000409952 MRGPRG-AS1Q2M3A8 158 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 LINC00303Q3SY05 128 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 HACD4Q5VWC8 232 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 RSBN1Q5VWQ0 802 aaPredicted RBP3.41□□□□□ -1.86
LSM5-205ENST00000409952 OTPQ5XKR4 325 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 CLEC20AQ6ZU45 233 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 SLC16A13Q7RTY0 426 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 LINC00596Q86U02 117 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 AKAP14Q86UN6 197 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 KRTAP7-1Q8IUC3 87 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 TMEM161BQ8NDZ6 487 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 PXT1Q8NFP0 134 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 OR11L1Q8NGX0 322 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 COQ8AQ8NI60 647 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 TWIST2Q8WVJ9 160 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 TMBIM1Q969X1 311 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 BMFQ96LC9 184 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 YPEL4Q96NS1 127 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 OR2A5Q96R48 311 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 NRTNQ99748 197 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 ANAPC13Q9BS18 74 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 FGF23Q9GZV9 251 aaPredicted RBP3.41□□□□□ -1.86
LSM5-205ENST00000409952 DDX19AQ9NUU7 478 aaKnown RBP3.41□□□□□ -1.86
LSM5-205ENST00000409952 ZNF223Q9UK11 482 aaPredicted RBP3.41□□□□□ -1.86
LSM5-205ENST00000409952 FBXO5Q9UKT4 447 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 RAB26Q9ULW5 256 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 SLC22A7Q9Y694 548 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 ZNF780BQ9Y6R6 833 aa3.41□□□□□ -1.86
LSM5-205ENST00000409952 ZCCHC6Q5VYS8 1495 aaKnown RBP3.41□□□□□ -1.86
LSM5-205ENST00000409952 TMEM72A0PK05 275 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 OR5H1A6NKK0 313 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 EVPLLA8MZ36 301 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 H3BQV1 296 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 M0QYV0 167 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 SOCS1O15524 211 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 TCF21O43680 179 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 COX7A2P2O60397 106 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 EIF1BO60739 113 aaKnown RBP3.4□□□□□ -1.87
LSM5-205ENST00000409952 YIF1AO95070 293 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 GAS8-AS1O95177 125 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 UCHL3P15374 230 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 CXCL2P19875 107 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 CXCL3P19876 107 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 EIF1P41567 113 aaKnown RBP3.4□□□□□ -1.87
LSM5-205ENST00000409952 NAA20P61599 178 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 RAP1AP62834 184 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 PTGES3Q15185 160 aaKnown RBP3.4□□□□□ -1.87
LSM5-205ENST00000409952 PTPRKQ15262 1439 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 TAF1AQ15573 450 aaPredicted RBP3.4□□□□□ -1.87
LSM5-205ENST00000409952 MAPK14Q16539 360 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 CENPWQ5EE01 88 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 SLC25A30Q5SVS4 291 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 ZNF684Q5T5D7 378 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 NXNL2Q5VZ03 156 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 SPATA31B1PQ5VZV4 182 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 OR10K2Q6IF99 312 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 ZNF774Q6NX45 483 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 SCGB1D4Q6XE38 83 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 ADAMTS13Q76LX8 1427 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 S100A7AQ86SG5 101 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 SLC51BQ86UW2 128 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 MYPOPQ86VE0 399 aaPredicted RBP3.4□□□□□ -1.87
LSM5-205ENST00000409952 SLC35G3Q8N808 338 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 OR5K1Q8NHB7 308 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 MFSD8Q8NHS3 518 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 LINC01006Q8NI28 216 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 TNFAIP8L1Q8WVP5 186 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 ZNF717Q9BY31 904 aaPredicted RBP3.4□□□□□ -1.87
LSM5-205ENST00000409952 GLTPQ9NZD2 209 aa3.4□□□□□ -1.87
LSM5-205ENST00000409952 POMPQ9Y244 141 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms